Aliases for TSPY26P Gene

Aliases for TSPY26P Gene

  • Testis Specific Protein Y-Linked 26, Pseudogene 2 3 5
  • TSPY-Like 3 (Pseudogene) 2 3
  • TSPYL3 3 4
  • Putative Testis-Specific Y-Encoded-Like Protein 3 4
  • Testis Specific Protein, Y-Linked 26, Pseudogene 2
  • Testis-Specific Y-Encoded Protein 26 Pseudogene 4
  • TSPY-Like Protein 3 4
  • TSPY-Like 3 2
  • BA392M18.1 3

External Ids for TSPY26P Gene

Previous HGNC Symbols for TSPY26P Gene

  • TSPYL3

Previous GeneCards Identifiers for TSPY26P Gene

  • GC20M030777

Summaries for TSPY26P Gene

GeneCards Summary for TSPY26P Gene

TSPY26P (Testis Specific Protein Y-Linked 26, Pseudogene) is a Pseudogene.

Additional gene information for TSPY26P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TSPY26P Gene

Genomics for TSPY26P Gene

GeneHancer (GH) Regulatory Elements for TSPY26P Gene

Promoters and enhancers for TSPY26P Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TSPY26P on UCSC Golden Path with GeneCards custom track

Genomic Locations for TSPY26P Gene

Genomic Locations for TSPY26P Gene
chr20:32,186,477-32,190,527
(GRCh38/hg38)
Size:
4,051 bases
Orientation:
Minus strand
chr20:30,774,280-30,778,330
(GRCh37/hg19)
Size:
4,051 bases
Orientation:
Minus strand

Genomic View for TSPY26P Gene

Genes around TSPY26P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TSPY26P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TSPY26P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TSPY26P Gene

Proteins for TSPY26P Gene

  • Protein details for TSPY26P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H489-TSY26_HUMAN
    Recommended name:
    Putative testis-specific Y-encoded-like protein 3
    Protein Accession:
    Q9H489
    Secondary Accessions:
    • Q3MJ63
    • Q3MJ65

    Protein attributes for TSPY26P Gene

    Size:
    355 amino acids
    Molecular mass:
    39573 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TSPY26P Gene

Post-translational modifications for TSPY26P Gene

No Post-translational modifications

No data available for DME Specific Peptides for TSPY26P Gene

Domains & Families for TSPY26P Gene

Protein Domains for TSPY26P Gene

Blocks:
  • Nucleosome assembly protein (NAP)
InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for TSPY26P Gene

GenScript: Design optimal peptide antigens:
  • Testis-specific Y-encoded protein 26 pseudogene (TSY26_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q9H489

UniProtKB/Swiss-Prot:

TSY26_HUMAN :
  • Belongs to the nucleosome assembly protein (NAP) family.
Family:
  • Belongs to the nucleosome assembly protein (NAP) family.
genes like me logo Genes that share domains with TSPY26P: view

No data available for Gene Families for TSPY26P Gene

Function for TSPY26P Gene

Phenotypes From GWAS Catalog for TSPY26P Gene

genes like me logo Genes that share phenotypes with TSPY26P: view

Animal Model Products

CRISPR Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TSPY26P Gene

Localization for TSPY26P Gene

Gene Ontology (GO) - Cellular Components for TSPY26P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with TSPY26P: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for TSPY26P Gene

Pathways & Interactions for TSPY26P Gene

PathCards logo

SuperPathways for TSPY26P Gene

No Data Available

Interacting Proteins for TSPY26P Gene

Selected Interacting proteins: Q9H489-TSY26_HUMAN for TSPY26P Gene via IID

;

Gene Ontology (GO) - Biological Process for TSPY26P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006334 nucleosome assembly IEA --
genes like me logo Genes that share ontologies with TSPY26P: view

No data available for Pathways by source and SIGNOR curated interactions for TSPY26P Gene

Drugs & Compounds for TSPY26P Gene

No Compound Related Data Available

Transcripts for TSPY26P Gene

mRNA/cDNA for TSPY26P Gene

2 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TSPY26P Gene

No ASD Table

Relevant External Links for TSPY26P Gene

GeneLoc Exon Structure for
TSPY26P

Expression for TSPY26P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TSPY26P Gene

Protein differential expression in normal tissues from HIPED for TSPY26P Gene

This gene is overexpressed in Peripheral blood mononuclear cells (41.1), Frontal cortex (16.5), and Colon (11.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for TSPY26P Gene



Protein tissue co-expression partners for TSPY26P Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TSPY26P

SOURCE GeneReport for Unigene cluster for TSPY26P Gene:

Hs.647447
genes like me logo Genes that share expression patterns with TSPY26P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TSPY26P Gene

Orthologs for TSPY26P Gene

Evolution for TSPY26P Gene

ENSEMBL:
Gene Tree for TSPY26P (if available)
TreeFam:
Gene Tree for TSPY26P (if available)

No data available for Orthologs for TSPY26P Gene

Paralogs for TSPY26P Gene

(15) SIMAP similar genes for TSPY26P Gene using alignment to 1 proteins:

  • TSY26_HUMAN
genes like me logo Genes that share paralogs with TSPY26P: view

No data available for Paralogs for TSPY26P Gene

Variants for TSPY26P Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for TSPY26P Gene

SNP ID Clinical significance and condition Chr 20 pos Variation AA Info Type
rs3813922 - p.Pro246His

Structural Variations from Database of Genomic Variants (DGV) for TSPY26P Gene

Variant ID Type Subtype PubMed ID
nsv833953 CNV loss 17160897
nsv833954 CNV loss 17160897

Additional Variant Information for TSPY26P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TSPY26P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Additional dbSNP identifiers (rs#s) and Variation tolerance for TSPY26P Gene

Disorders for TSPY26P Gene

Additional Disease Information for TSPY26P

No disorders were found for TSPY26P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TSPY26P Gene

Publications for TSPY26P Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 54
  2. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P … Rogers J (Nature 2001) 3 4 54
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for TSPY26P Gene

Sources for TSPY26P Gene