TRY-GTA3-1 Gene (RNA Gene)

TRNA-Tyr (Anticodon GTA) 3-1

GC06P028758
GIFtS:
6
See more...

Aliases for TRY-GTA3-1 Gene

Subcategory (RNA class) for TRY-GTA3-1 Gene

tRNA

Number of RNA Genes sources:

3 / 17

Aliases for TRY-GTA3-1 Gene

  • TRNA-Tyr (Anticodon GTA) 3-1 2 3
  • TRNA-Tyr-GTA-3-1 2 3 162
  • Transfer RNA Tyrosine 7 (Anticodon GUA) 2 3
  • Transfer RNA-Tyr (GTA) 3-1 2 3
  • TRY-GTA3-1 2
  • RF00005 168
  • TRNAY7 3

External Ids for TRY-GTA3-1 Gene

Previous HGNC Symbols for TRY-GTA3-1 Gene

  • TRNAY7

Previous GeneCards Identifiers for TRY-GTA3-1 Gene

  • GC06P026614
  • GC06P026657
  • GC06P027356
  • GC06P027492
  • GC06P027588
  • GC06P028039
  • GC06P026696
  • GC06P026733
  • GC06P026772
  • GC06P026833
  • GC06P026933
  • GC06P027028
  • GC06P027110
  • GC06P027255

Summaries for TRY-GTA3-1 Gene

GeneCards Summary for TRY-GTA3-1 Gene

TRY-GTA3-1 (TRNA-Tyr (Anticodon GTA) 3-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRY-GTA3-1 Gene

Additional gene information for TRY-GTA3-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRY-GTA3-1 Gene

Genomics for TRY-GTA3-1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for TRY-GTA3-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J026576 Enhancer 1.2 ENCODE dbSUPER 600.7 +0.0 17 1.3 GATAD2A TEAD4 ZNF629 TFE3 LEF1 IKZF1 ZNF692 RCOR2 JUND MTA2 TRY-GTA3-1 TRY-GTA8-1 piR-36339 piR-45029 ZNF322 BTN3A2 HMGN4 BTN2A1 GUSBP2 ENSG00000261584
GH06J026575 Enhancer 1.1 ENCODE dbSUPER 600.7 -1.5 -1456 0.2 ZNF221 PRDM10 ZNF629 IKZF1 ZNF692 PRDM1 MTA2 MTA1 BRD9 ZNF501 TRY-GTA3-1 TRY-GTA8-1 piR-36339 piR-45029 ZNF391 ZNF322 ABT1 HMGN4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRY-GTA3-1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRY-GTA3-1 Gene

Genomic Locations for TRY-GTA3-1 Gene
chr6:26,577,104-26,577,193
(GRCh38/hg38)
Size:
90 bases
Orientation:
Plus strand
chr6:26,577,332-26,577,420
(GRCh37/hg19)
Size:
89 bases
Orientation:
Plus strand

Genomic View for TRY-GTA3-1 Gene

Genes around TRY-GTA3-1 on UCSC Golden Path with GeneCards custom track
TRY-GTA3-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
TRY-GTA3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRY-GTA3-1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TRY-GTA3-1 Gene

Proteins for TRY-GTA3-1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TRY-GTA3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRY-GTA3-1 Gene

Domains & Families for TRY-GTA3-1 Gene

Gene Families for TRY-GTA3-1 Gene

HGNC:
genes like me logo Genes that share domains with TRY-GTA3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRY-GTA3-1 Gene

Function for TRY-GTA3-1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for TRY-GTA3-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRY-GTA3-1 Gene

Localization for TRY-GTA3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRY-GTA3-1 Gene

Pathways & Interactions for TRY-GTA3-1 Gene

PathCards logo

SuperPathways for TRY-GTA3-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRY-GTA3-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRY-GTA3-1 Gene

Drugs & Compounds for TRY-GTA3-1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TRY-GTA3-1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRY-GTA3-1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000758799_9606 tRNA 73 3

HGNC: 34724,

GtRNAdb: tRNA-Tyr-GTA-3-1:CM000668.1:26577332-26577420, tRNA-Tyr-GTA-3-1:CM000668.2:26577104-26577192,

ENA: HG984076.1:1..89:tRNA,

URS00006E64C2_9606 tRNA 89 1

Rfam: RF00005,

URS00002CA973_9606 tRNA 73 1

ENA: X04779.1:1..74:tRNA,

TRY-GTA3-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRY-GTA3-1 Gene

No ASD Table

Relevant External Links for TRY-GTA3-1 Gene

GeneLoc Exon Structure for
TRY-GTA3-1

No data available for mRNA/cDNA for TRY-GTA3-1 Gene

Expression for TRY-GTA3-1 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRY-GTA3-1 Gene

Orthologs for TRY-GTA3-1 Gene

No data available for Orthologs and Evolution for TRY-GTA3-1 Gene

Paralogs for TRY-GTA3-1 Gene

No data available for Paralogs for TRY-GTA3-1 Gene

Variants for TRY-GTA3-1 Gene

Additional Variant Information for TRY-GTA3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRY-GTA3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRY-GTA3-1 Gene

Disorders for TRY-GTA3-1 Gene

No disorders were found for TRY-GTA3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRY-GTA3-1 Gene

Publications for TRY-GTA3-1 Gene

No publications were found for TRY-GTA3-1 Gene.

No data available for Mastermind for TRY-GTA3-1 Gene

Products for TRY-GTA3-1 Gene

Sources for TRY-GTA3-1 Gene