Aliases for TRW-CCA3-1 Gene

Subcategory (RNA class) for TRW-CCA3-1 Gene

tRNA

Quality Score for this RNA gene is

13

Aliases for TRW-CCA3-1 Gene

  • TRNA-Trp (Anticodon CCA) 3-1 2 3
  • Transfer RNA Tryptophan 9 (Anticodon CCA) 2 3
  • Transfer RNA-Trp (CCA) 3-1 2 3
  • Transfer RNA-Trp (CCA) 3-2 2 3
  • TRNA-Trp-CCA-3-1 3 167
  • TRNA-Trp-CCA-3-2 3 167
  • TRW-CCA3-2 2 3
  • TRNA-Trp-CCA-3-3 167
  • TRW-CCA3-3 2
  • TRW-CCA3-1 2
  • RF00005 174
  • TRNAW9 3

External Ids for TRW-CCA3-1 Gene

Previous HGNC Symbols for TRW-CCA3-1 Gene

  • TRNAW9
  • TRW-CCA3-2

Previous GeneCards Identifiers for TRW-CCA3-1 Gene

  • GC17P008188
  • GC17P008199
  • GC06M026794
  • GC06M026834
  • GC06M026495
  • GC06M026514
  • GC06M026545
  • GC06M026550
  • GC06M026606
  • GC06M026648
  • GC06M026687
  • GC06M026750

Summaries for TRW-CCA3-1 Gene

GeneCards Summary for TRW-CCA3-1 Gene

TRW-CCA3-1 (TRNA-Trp (Anticodon CCA) 3-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRW-CCA3-1 Gene

Additional gene information for TRW-CCA3-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRW-CCA3-1 Gene

Genomics for TRW-CCA3-1 Gene

GeneHancer (GH) Regulatory Elements for TRW-CCA3-1 Gene

Promoters and enhancers for TRW-CCA3-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J026319 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 750.6 -0.5 -528 2.2 GTF3C2 ZNF24 ZBTB40 SMARCE1 GTF2F1 ZFX CEBPG MLLT1 SMARCA4 HNF1A TRW-CCA3-1 lnc-HIST1H2BI-3 ABT1 BTN2A3P BTN3A2 ZNF322 BTN2A2 BTN2A1 HMGN4 GUSBP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRW-CCA3-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRW-CCA3-1 Gene

Genomic Locations for TRW-CCA3-1 Gene
chr6:26,319,102-26,319,173
(GRCh38/hg38)
Size:
72 bases
Orientation:
Minus strand
chr6:26,319,330-26,319,401
(GRCh37/hg19)
Size:
72 bases
Orientation:
Minus strand

Genomic View for TRW-CCA3-1 Gene

Genes around TRW-CCA3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRW-CCA3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRW-CCA3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRW-CCA3-1 Gene

Proteins for TRW-CCA3-1 Gene

Post-translational modifications for TRW-CCA3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRW-CCA3-1 Gene

Domains & Families for TRW-CCA3-1 Gene

Gene Families for TRW-CCA3-1 Gene

genes like me logo Genes that share domains with TRW-CCA3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRW-CCA3-1 Gene

Function for TRW-CCA3-1 Gene

Phenotypes From GWAS Catalog for TRW-CCA3-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRW-CCA3-1 Gene

Localization for TRW-CCA3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRW-CCA3-1 Gene

Pathways & Interactions for TRW-CCA3-1 Gene

PathCards logo

SuperPathways for TRW-CCA3-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRW-CCA3-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRW-CCA3-1 Gene

Drugs & Compounds for TRW-CCA3-1 Gene

No Compound Related Data Available

Transcripts for TRW-CCA3-1 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRW-CCA3-1 Gene

No ASD Table

Relevant External Links for TRW-CCA3-1 Gene

GeneLoc Exon Structure for
TRW-CCA3-1
ECgene alternative splicing isoforms for
TRW-CCA3-1

Expression for TRW-CCA3-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRW-CCA3-1 Gene

Orthologs for TRW-CCA3-1 Gene

No data available for Orthologs and Evolution for TRW-CCA3-1 Gene

Paralogs for TRW-CCA3-1 Gene

No data available for Paralogs for TRW-CCA3-1 Gene

Variants for TRW-CCA3-1 Gene

Additional Variant Information for TRW-CCA3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRW-CCA3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRW-CCA3-1 Gene

Disorders for TRW-CCA3-1 Gene

No disorders were found for TRW-CCA3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRW-CCA3-1 Gene

Publications for TRW-CCA3-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 56

No data available for External Links for TRW-CCA3-1 Gene

Products for TRW-CCA3-1 Gene

Sources for TRW-CCA3-1 Gene