Aliases for TRV-TAC3-1 Gene

Data sources for TRV-TAC3-1 Gene:

RNA type for TRV-TAC3-1 Gene


Aliases for TRV-TAC3-1 Gene

External Ids for TRV-TAC3-1 Gene

Previous HGNC Symbols for TRV-TAC3-1 Gene

  • TRNAV26

Summaries for TRV-TAC3-1 Gene

GeneCards Summary for TRV-TAC3-1 Gene

TRV-TAC3-1 (TRNA-Val (Anticodon TAC) 3-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRV-TAC3-1 Gene

Additional gene information for TRV-TAC3-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRV-TAC3-1 Gene

Genomics for TRV-TAC3-1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TRV-TAC3-1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J005852 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 250.7 +0.8 826 1.8 BCLAF1 SP1 ZNF600 IKZF1 SSRP1 ZNF580 ZNF592 ZMYM3 ZSCAN16 NFIC TRV-TAC3-1 FBH1 TASOR2 ENSG00000232807 GDI2 ANKRD16 PFKFB3 IL15RA lnc-FBXO18-1
GH10J005860 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -8.3 -8271 2.3 BCLAF1 SP1 ZNF600 JUND ZMYM3 CEBPA BCL11A TARDBP TRIM22 ZNF639 RPL12P28 lnc-GDI2-2 ANKRD16 ENSG00000232807 FBH1 GDI2 TRV-TAC3-1 lnc-FBXO18-1
GH10J005858 Enhancer 0.2 ENCODE 0.4 -5.1 -5090 0.2 ENSG00000232807 lnc-GDI2-2 TRV-TAC3-1 lnc-FBXO18-1 GDI2 FBH1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRV-TAC3-1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRV-TAC3-1 Gene

Latest Assembly
73 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
73 bases
Minus strand

Genomic View for TRV-TAC3-1 Gene

Genes around TRV-TAC3-1 on UCSC Golden Path with GeneCards custom track
TRV-TAC3-1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
TRV-TAC3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRV-TAC3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRV-TAC3-1 Gene

Proteins for TRV-TAC3-1 Gene

Post-translational modifications for TRV-TAC3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRV-TAC3-1 Gene

Domains & Families for TRV-TAC3-1 Gene

Gene Families for TRV-TAC3-1 Gene

genes like me logo Genes that share domains with TRV-TAC3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRV-TAC3-1 Gene

Function for TRV-TAC3-1 Gene

Phenotypes From GWAS Catalog for TRV-TAC3-1 Gene

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRV-TAC3-1 Gene

Localization for TRV-TAC3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRV-TAC3-1 Gene

Pathways & Interactions for TRV-TAC3-1 Gene

PathCards logo

SuperPathways for TRV-TAC3-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRV-TAC3-1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRV-TAC3-1 Gene

Drugs & Compounds for TRV-TAC3-1 Gene

No Compound Related Data Available

Transcripts for TRV-TAC3-1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRV-TAC3-1 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000064D54F_9606 ncRNA 73 3

GtRNAdb: tRNA-Val-TAC-3-1:CM000672.2:5853711-5853783,

Rfam: RF00005,

ENA: HG984134.1:1..73:tRNA,

TRV-TAC3-1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for TRV-TAC3-1 Gene

No ASD Table

Relevant External Links for TRV-TAC3-1 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for TRV-TAC3-1 Gene

Expression for TRV-TAC3-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRV-TAC3-1 Gene

Orthologs for TRV-TAC3-1 Gene

No data available for Orthologs and Evolution for TRV-TAC3-1 Gene

Paralogs for TRV-TAC3-1 Gene

No data available for Paralogs for TRV-TAC3-1 Gene

Variants for TRV-TAC3-1 Gene

Additional Variant Information for TRV-TAC3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
Leiden Open Variation Database (LOVD)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRV-TAC3-1 Gene

Disorders for TRV-TAC3-1 Gene

No disorders were found for TRV-TAC3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRV-TAC3-1 Gene

Publications for TRV-TAC3-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3

No data available for Mastermind for TRV-TAC3-1 Gene

Products for TRV-TAC3-1 Gene

Sources for TRV-TAC3-1 Gene