Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRV-AAC1-1 Gene

Subcategory (RNA class) for TRV-AAC1-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRV-AAC1-1 Gene

  • Transfer RNA-Val (AAC) 1-1 2 3
  • Transfer RNA Valine 24 (Anticodon AAC) 2 3
  • TRNA-Val-AAC-1-1 3
  • TRNAV24 3

External Ids for TRV-AAC1-1 Gene

Previous HGNC Symbols for TRV-AAC1-1 Gene

  • TRNAV24

Summaries for TRV-AAC1-1 Gene

GeneCards Summary for TRV-AAC1-1 Gene

TRV-AAC1-1 (Transfer RNA-Val (AAC) 1-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRV-AAC1-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRV-AAC1-1 Gene

Genomics for TRV-AAC1-1 Gene

GeneHancer (GH) Regulatory Elements for TRV-AAC1-1 Gene

Promoters and enhancers for TRV-AAC1-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I169771 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 +0.9 850 3.4 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 MYNN PIR36992 TRV-AAC1-1 PHC3 PRKCI SEC62-AS1 CLDN11 LRRC34 ENSG00000270096 ENSG00000269889
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRV-AAC1-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRV-AAC1-1 Gene

Genomic Locations for TRV-AAC1-1 Gene
chr3:169,772,230-169,772,302
(GRCh38/hg38)
Size:
73 bases
Orientation:
Plus strand
chr3:169,490,018-169,490,090
(GRCh37/hg19)

Genomic View for TRV-AAC1-1 Gene

Genes around TRV-AAC1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRV-AAC1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRV-AAC1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRV-AAC1-1 Gene

Proteins for TRV-AAC1-1 Gene

Post-translational modifications for TRV-AAC1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRV-AAC1-1 Gene

Domains & Families for TRV-AAC1-1 Gene

Gene Families for TRV-AAC1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRV-AAC1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRV-AAC1-1 Gene

Function for TRV-AAC1-1 Gene

Phenotypes From GWAS Catalog for TRV-AAC1-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRV-AAC1-1 Gene

Localization for TRV-AAC1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRV-AAC1-1 Gene

Pathways & Interactions for TRV-AAC1-1 Gene

SuperPathways for TRV-AAC1-1 Gene

No Data Available

Interacting Proteins for TRV-AAC1-1 Gene

Gene Ontology (GO) - Biological Process for TRV-AAC1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRV-AAC1-1 Gene

Drugs & Compounds for TRV-AAC1-1 Gene

No Compound Related Data Available

Transcripts for TRV-AAC1-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRV-AAC1-1 Gene

No ASD Table

Relevant External Links for TRV-AAC1-1 Gene

GeneLoc Exon Structure for
TRV-AAC1-1
ECgene alternative splicing isoforms for
TRV-AAC1-1

No data available for mRNA/cDNA for TRV-AAC1-1 Gene

Expression for TRV-AAC1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRV-AAC1-1 Gene

Orthologs for TRV-AAC1-1 Gene

No data available for Orthologs and Evolution for TRV-AAC1-1 Gene

Paralogs for TRV-AAC1-1 Gene

No data available for Paralogs for TRV-AAC1-1 Gene

Variants for TRV-AAC1-1 Gene

Additional Variant Information for TRV-AAC1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRV-AAC1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRV-AAC1-1 Gene

Disorders for TRV-AAC1-1 Gene

No disorders were found for TRV-AAC1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRV-AAC1-1 Gene

Publications for TRV-AAC1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58
  2. Identity determinants of human tRNA(Ser): sequence elements necessary for serylation and maturation of a tRNA with a long extra arm. (PMID: 8344269) Achsel T … Gross HJ (The EMBO journal 1993) 3 58
  3. The first human genes for tRNA(ArgICG), tRNA(GlyUCC), and tRNA(ThrIGU) and more tRNA(Val) pseudogenes: expression and pre-tRNA maturation in HeLa cell-free extracts. (PMID: 1457046) Kaçar Y … Gross HJ (DNA and cell biology 1992) 3 58

Products for TRV-AAC1-1 Gene

Sources for TRV-AAC1-1 Gene

Content
Loading form....