Aliases for TRUND-NNN8-1 Gene

Aliases for TRUND-NNN8-1 Gene

  • TRNA-Undetermined (NNN) 8-1 2 3
  • Transfer RNA-Undetermined (NNN) 8-1 2 3
  • TRNA-Und-NNN-8-1 3

External Ids for TRUND-NNN8-1 Gene

Previous GeneCards Identifiers for TRUND-NNN8-1 Gene

  • GC01U904844

Summaries for TRUND-NNN8-1 Gene

GeneCards Summary for TRUND-NNN8-1 Gene

TRUND-NNN8-1 (TRNA-Undetermined (NNN) 8-1) is a Pseudogene.

Additional gene information for TRUND-NNN8-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TRUND-NNN8-1 Gene

Genomics for TRUND-NNN8-1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TRUND-NNN8-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J107952 Enhancer 0.6 dbSUPER 250.7 -1.8 -1837 6.3 SPI1 RAD21 ZNF664 JUNB MAX MZF1 EED NR2F2 PRDM1 EZH2 HG984097 TRUND-NNN8-1 VAV3 GPSM2 VAV3-AS1 NTNG1
GH01J107961 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -10.1 -10146 5.2 ZNF600 POLR2A ZNF341 SIN3A ZNF217 CTBP1 MAFF YY1 MAFK ZNF205 VAV3 VAV3-AS1 HSALNG0005788 HG984097 TRUND-NNN8-1 NTNG1
GH01J107934 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.4 +17.6 17555 3.7 BCLAF1 SP1 ZNF600 JUND ZNF10 BCL11A CEBPB TARDBP TRIM22 FEZF1 VAV3 VAV3-AS1 TRUND-NNN8-1 HG984097 MIR7852 NTNG1
GH01J107948 Enhancer 0.7 dbSUPER 0.7 +3.5 3506 2.9 BCL11A IRF4 EBF1 BHLHE40 BATF STAT5A MTA3 ATF2 JUNB ZBED1 VAV3 HG984097 TRUND-NNN8-1 MIR7852 NTNG1
GH01J107940 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 0.4 +11.3 11279 4.2 SPI1 MYC POLR2A CEBPB CEBPG VAV3 VAV3-AS1 HG984097 TRUND-NNN8-1 MIR7852 NTNG1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRUND-NNN8-1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRUND-NNN8-1 Gene

Latest Assembly
chr1:107,953,653-107,953,723
(GRCh38/hg38)
Size:
71 bases
Orientation:
Minus strand

Previous Assembly
chr1:108,496,275-108,496,345
(GRCh37/hg19 by Entrez Gene)
Size:
71 bases
Orientation:
Minus strand

Genomic View for TRUND-NNN8-1 Gene

Genes around TRUND-NNN8-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRUND-NNN8-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRUND-NNN8-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRUND-NNN8-1 Gene

Proteins for TRUND-NNN8-1 Gene

Post-translational modifications for TRUND-NNN8-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRUND-NNN8-1 Gene

Domains & Families for TRUND-NNN8-1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRUND-NNN8-1 Gene

Function for TRUND-NNN8-1 Gene

Phenotypes From GWAS Catalog for TRUND-NNN8-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRUND-NNN8-1 Gene

Localization for TRUND-NNN8-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRUND-NNN8-1 Gene

Pathways & Interactions for TRUND-NNN8-1 Gene

PathCards logo

SuperPathways for TRUND-NNN8-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRUND-NNN8-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRUND-NNN8-1 Gene

Drugs & Compounds for TRUND-NNN8-1 Gene

No Compound Related Data Available

Transcripts for TRUND-NNN8-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRUND-NNN8-1 Gene

No ASD Table

Relevant External Links for TRUND-NNN8-1 Gene

GeneLoc Exon Structure for
TRUND-NNN8-1

No data available for mRNA/cDNA for TRUND-NNN8-1 Gene

Expression for TRUND-NNN8-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRUND-NNN8-1 Gene

Orthologs for TRUND-NNN8-1 Gene

No data available for Orthologs and Evolution for TRUND-NNN8-1 Gene

Paralogs for TRUND-NNN8-1 Gene

No data available for Paralogs for TRUND-NNN8-1 Gene

Variants for TRUND-NNN8-1 Gene

Additional Variant Information for TRUND-NNN8-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRUND-NNN8-1
Leiden Open Variation Database (LOVD)
TRUND-NNN8-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRUND-NNN8-1 Gene

Disorders for TRUND-NNN8-1 Gene

No disorders were found for TRUND-NNN8-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRUND-NNN8-1 Gene

Publications for TRUND-NNN8-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 2 3

No data available for Mastermind for TRUND-NNN8-1 Gene

Products for TRUND-NNN8-1 Gene

Sources for TRUND-NNN8-1 Gene