Aliases for TRS-GCT2-1 Gene

Subcategory (RNA class) for TRS-GCT2-1 Gene

tRNA

Number of RNA Genes sources:

3 / 17

Aliases for TRS-GCT2-1 Gene

  • TRNA-Ser (Anticodon GCT) 2-1 2 3
  • TRNA-Ser-GCT-2-1 2 3 162
  • Transfer RNA Serine 5 (Anticodon GCU) 2 3
  • Transfer RNA-Ser (GCT) 2-1 2 3
  • TRS-GCT2-1 2
  • RF00005 168
  • TRNAS5 3

External Ids for TRS-GCT2-1 Gene

Previous HGNC Symbols for TRS-GCT2-1 Gene

  • TRNAS5

Summaries for TRS-GCT2-1 Gene

GeneCards Summary for TRS-GCT2-1 Gene

TRS-GCT2-1 (TRNA-Ser (Anticodon GCT) 2-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRS-GCT2-1 Gene

Additional gene information for TRS-GCT2-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRS-GCT2-1 Gene

Genomics for TRS-GCT2-1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TRS-GCT2-1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRS-GCT2-1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRS-GCT2-1 Gene

Genomic Locations for TRS-GCT2-1 Gene
chr6:27,297,996-27,298,077
(GRCh38/hg38)
Size:
82 bases
Orientation:
Plus strand
chr6:27,265,775-27,265,856
(GRCh37/hg19)
Size:
82 bases
Orientation:
Plus strand

Genomic View for TRS-GCT2-1 Gene

Genes around TRS-GCT2-1 on UCSC Golden Path with GeneCards custom track
TRS-GCT2-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
TRS-GCT2-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRS-GCT2-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRS-GCT2-1 Gene

Proteins for TRS-GCT2-1 Gene

Post-translational modifications for TRS-GCT2-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRS-GCT2-1 Gene

Domains & Families for TRS-GCT2-1 Gene

Gene Families for TRS-GCT2-1 Gene

genes like me logo Genes that share domains with TRS-GCT2-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRS-GCT2-1 Gene

Function for TRS-GCT2-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRS-GCT2-1 Gene

Localization for TRS-GCT2-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRS-GCT2-1 Gene

Pathways & Interactions for TRS-GCT2-1 Gene

PathCards logo

SuperPathways for TRS-GCT2-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRS-GCT2-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRS-GCT2-1 Gene

Drugs & Compounds for TRS-GCT2-1 Gene

No Compound Related Data Available

Transcripts for TRS-GCT2-1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRS-GCT2-1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000664EAD_9606 tRNA 82 4

HGNC: 34559,

GtRNAdb: tRNA-Ser-GCT-2-1:CM000668.1:27265775-27265856, tRNA-Ser-GCT-2-1:CM000668.2:27297996-27298077,

Rfam: RF00005,

ENA: HG984025.1:1..82:tRNA,

TRS-GCT2-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRS-GCT2-1 Gene

No ASD Table

Relevant External Links for TRS-GCT2-1 Gene

GeneLoc Exon Structure for
TRS-GCT2-1

No data available for mRNA/cDNA for TRS-GCT2-1 Gene

Expression for TRS-GCT2-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRS-GCT2-1 Gene

Orthologs for TRS-GCT2-1 Gene

No data available for Orthologs and Evolution for TRS-GCT2-1 Gene

Paralogs for TRS-GCT2-1 Gene

No data available for Paralogs for TRS-GCT2-1 Gene

Variants for TRS-GCT2-1 Gene

Additional Variant Information for TRS-GCT2-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRS-GCT2-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRS-GCT2-1 Gene

Disorders for TRS-GCT2-1 Gene

No disorders were found for TRS-GCT2-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRS-GCT2-1 Gene

Publications for TRS-GCT2-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3

No data available for Mastermind for TRS-GCT2-1 Gene

Products for TRS-GCT2-1 Gene

Sources for TRS-GCT2-1 Gene