Aliases for TRR-TCT5-1 Gene

Subcategory (RNA class) for TRR-TCT5-1 Gene

tRNA

Quality Score for this RNA gene is

13

Aliases for TRR-TCT5-1 Gene

  • TRNA-Arg (Anticodon TCT) 5-1 2 3
  • Transfer RNA Arginine 5 (Anticodon UCU) 2 3
  • Transfer RNA-Arg (TCT) 5-1 2 3
  • TRNA-Arg-TCT-5-1 3 167
  • TRR-TCT5-1 2
  • RF00005 174
  • TRNAR5 3

External Ids for TRR-TCT5-1 Gene

Previous HGNC Symbols for TRR-TCT5-1 Gene

  • TRNAR5

Summaries for TRR-TCT5-1 Gene

GeneCards Summary for TRR-TCT5-1 Gene

TRR-TCT5-1 (TRNA-Arg (Anticodon TCT) 5-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRR-TCT5-1 Gene

Additional gene information for TRR-TCT5-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRR-TCT5-1 Gene

Genomics for TRR-TCT5-1 Gene

GeneHancer (GH) Regulatory Elements for TRR-TCT5-1 Gene

Promoters and enhancers for TRR-TCT5-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J027562 Promoter/Enhancer 0.9 Ensembl ENCODE 750.6 -0.4 -383 1.2 GTF3C2 EGR1 ZNF316 ZNF24 ATF3 USF1 CEBPB ZNF143 POLR3A ZBTB33 CD83P1 TRR-TCT5-1 lnc-ZNF184-4 ABT1 ZKSCAN3 ZKSCAN4 ZKSCAN8 ZNF603P
GH06J027568 Enhancer 0.9 Ensembl ENCODE 0.4 +6.3 6327 1 SMARCE1 MNT CBFA2T2 SMARCA4 CEBPG DPF2 CEBPA RFX1 PHF21A PKNOX1 ZNF391 TRK-TTT9-1 TRR-TCT5-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRR-TCT5-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRR-TCT5-1 Gene

Genomic Locations for TRR-TCT5-1 Gene
chr6:27,562,184-27,562,270
(GRCh38/hg38)
Size:
87 bases
Orientation:
Plus strand
chr6:27,529,963-27,530,049
(GRCh37/hg19)
Size:
87 bases
Orientation:
Plus strand

Genomic View for TRR-TCT5-1 Gene

Genes around TRR-TCT5-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRR-TCT5-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRR-TCT5-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRR-TCT5-1 Gene

Proteins for TRR-TCT5-1 Gene

Post-translational modifications for TRR-TCT5-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRR-TCT5-1 Gene

Domains & Families for TRR-TCT5-1 Gene

Gene Families for TRR-TCT5-1 Gene

genes like me logo Genes that share domains with TRR-TCT5-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRR-TCT5-1 Gene

Function for TRR-TCT5-1 Gene

Phenotypes From GWAS Catalog for TRR-TCT5-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRR-TCT5-1 Gene

Localization for TRR-TCT5-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRR-TCT5-1 Gene

Pathways & Interactions for TRR-TCT5-1 Gene

PathCards logo

SuperPathways for TRR-TCT5-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRR-TCT5-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRR-TCT5-1 Gene

Drugs & Compounds for TRR-TCT5-1 Gene

No Compound Related Data Available

Transcripts for TRR-TCT5-1 Gene

mRNA/cDNA for TRR-TCT5-1 Gene

(2) RNACentral transcripts :
(1) ENA transcripts :
(2) GtRNAdb transcripts :
(1) Rfam transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRR-TCT5-1 Gene

No ASD Table

Relevant External Links for TRR-TCT5-1 Gene

GeneLoc Exon Structure for
TRR-TCT5-1
ECgene alternative splicing isoforms for
TRR-TCT5-1

Expression for TRR-TCT5-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRR-TCT5-1 Gene

Orthologs for TRR-TCT5-1 Gene

No data available for Orthologs and Evolution for TRR-TCT5-1 Gene

Paralogs for TRR-TCT5-1 Gene

No data available for Paralogs for TRR-TCT5-1 Gene

Variants for TRR-TCT5-1 Gene

Additional Variant Information for TRR-TCT5-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRR-TCT5-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRR-TCT5-1 Gene

Disorders for TRR-TCT5-1 Gene

No disorders were found for TRR-TCT5-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRR-TCT5-1 Gene

Publications for TRR-TCT5-1 Gene

No publications were found for TRR-TCT5-1 Gene.

No data available for External Links for TRR-TCT5-1 Gene

Products for TRR-TCT5-1 Gene

Sources for TRR-TCT5-1 Gene