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Aliases for TRR-CCT9-1 Gene

Subcategory (RNA class) for TRR-CCT9-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRR-CCT9-1 Gene

  • Transfer RNA-Arg (CCT) 9-1 2 3
  • Transfer RNA Arginine 34 (Anticodon CCU) Pseudogene 2 3
  • TRNA-Arg-CCT-9-1 3
  • TRNAR34P 3

External Ids for TRR-CCT9-1 Gene

Previous HGNC Symbols for TRR-CCT9-1 Gene

  • TRNAR34P

Summaries for TRR-CCT9-1 Gene

GeneCards Summary for TRR-CCT9-1 Gene

TRR-CCT9-1 (Transfer RNA-Arg (CCT) 9-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRR-CCT9-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRR-CCT9-1 Gene

Genomics for TRR-CCT9-1 Gene

GeneHancer (GH) Regulatory Elements for TRR-CCT9-1 Gene

Promoters and enhancers for TRR-CCT9-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I063886 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.4 -5.5 -5512 4 HDGF ARID4B SIN3A DMAP1 ZNF48 SLC30A9 POLR2B ZNF766 FOS RUNX3 MARK2 SPINDOC TRR-CCT9-1 GC11M063878 GC11M063888
GH11I063895 Enhancer 0.5 dbSUPER 0.8 +3.2 3230 3.5 NFIC ZNF680 BHLHE40 REST MNT MYC MARK2 NAA40 C11orf95 PLA2G16 GC11M063888 TRR-CCT9-1
GH11I063883 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -10.0 -10025 0.7 ZSCAN5C ZMYM3 FEZF1 GC11M063878 RNU6-1306P TRR-CCT9-1 MARK2
GH11I063891 Enhancer 0.3 dbSUPER 0.8 -2.6 -2595 0.8 REST MARK2 NAA40 PLA2G16 TRR-CCT9-1 GC11M063888 GC11M063878
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRR-CCT9-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRR-CCT9-1 Gene

Genomic Locations for TRR-CCT9-1 Gene
chr11:63,894,295-63,894,363
(GRCh38/hg38)
Size:
69 bases
Orientation:
Plus strand
chr11:63,661,767-63,661,835
(GRCh37/hg19)

Genomic View for TRR-CCT9-1 Gene

Genes around TRR-CCT9-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRR-CCT9-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRR-CCT9-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRR-CCT9-1 Gene

Proteins for TRR-CCT9-1 Gene

Post-translational modifications for TRR-CCT9-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRR-CCT9-1 Gene

Domains & Families for TRR-CCT9-1 Gene

Gene Families for TRR-CCT9-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRR-CCT9-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRR-CCT9-1 Gene

Function for TRR-CCT9-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRR-CCT9-1 Gene

Localization for TRR-CCT9-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRR-CCT9-1 Gene

Pathways & Interactions for TRR-CCT9-1 Gene

SuperPathways for TRR-CCT9-1 Gene

No Data Available

Interacting Proteins for TRR-CCT9-1 Gene

Gene Ontology (GO) - Biological Process for TRR-CCT9-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRR-CCT9-1 Gene

Drugs & Compounds for TRR-CCT9-1 Gene

No Compound Related Data Available

Transcripts for TRR-CCT9-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRR-CCT9-1 Gene

No ASD Table

Relevant External Links for TRR-CCT9-1 Gene

GeneLoc Exon Structure for
TRR-CCT9-1
ECgene alternative splicing isoforms for
TRR-CCT9-1

No data available for mRNA/cDNA for TRR-CCT9-1 Gene

Expression for TRR-CCT9-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRR-CCT9-1 Gene

Orthologs for TRR-CCT9-1 Gene

No data available for Orthologs and Evolution for TRR-CCT9-1 Gene

Paralogs for TRR-CCT9-1 Gene

No data available for Paralogs for TRR-CCT9-1 Gene

Variants for TRR-CCT9-1 Gene

Additional Variant Information for TRR-CCT9-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRR-CCT9-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRR-CCT9-1 Gene

Disorders for TRR-CCT9-1 Gene

No disorders were found for TRR-CCT9-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRR-CCT9-1 Gene

Publications for TRR-CCT9-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRR-CCT9-1 Gene

Sources for TRR-CCT9-1 Gene

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