Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRQ-TTG8-1 Gene

Subcategory (RNA class) for TRQ-TTG8-1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for TRQ-TTG8-1 Gene

  • TRNA-Gln (Anticodon TTG) 8-1 2 3
  • Transfer RNA Glutamine 45 (Anticodon UUG) Pseudogene 2 3
  • Transfer RNA-Gln (TTG) 8-1 2 3
  • TRNA-Gln-TTG-8-1 3
  • TRNAQ45P 3

External Ids for TRQ-TTG8-1 Gene

Previous HGNC Symbols for TRQ-TTG8-1 Gene

  • TRNAQ45P

Summaries for TRQ-TTG8-1 Gene

GeneCards Summary for TRQ-TTG8-1 Gene

TRQ-TTG8-1 (TRNA-Gln (Anticodon TTG) 8-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRQ-TTG8-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRQ-TTG8-1 Gene

Genomics for TRQ-TTG8-1 Gene

GeneHancer (GH) Regulatory Elements for TRQ-TTG8-1 Gene

Promoters and enhancers for TRQ-TTG8-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J009039 Enhancer 0.6 Ensembl ENCODE 600.7 -0.4 -388 1.2 CEBPB MAX TRQ-TTG8-1 MUC16 GC19P009058
GH19J009052 Enhancer 1 Ensembl ENCODE 0.4 -14.7 -14737 3.7 ZNF384 NFIB MAFK FOSL2 PKNOX1 PRDM10 ZIC2 RFX1 REST SMARCC1 MUC16 ZNF266 HNRNPM ZNF317 ZNF177 ZNF699 FBXL12 ZNF558 ZNF121 ZNF561
GH19J009043 Enhancer 0.5 ENCODE 0.7 -3.9 -3908 0.2 CBFA2T2 JUND FOS CBFA2T3 ACTL9 MBD3L1 TRQ-TTG8-1 GC19P009058
GH19J009049 Enhancer 0.7 Ensembl ENCODE 0.4 -10.7 -10684 1.4 SCRT2 RCOR1 ZNF623 USF2 PRDM10 POLR2A EGR2 MUC16 ZNF266 GC19P009058 TRQ-TTG8-1
GH19J009017 Enhancer 0.7 Ensembl ENCODE 0.3 +21.0 20972 2.4 CEBPB SP1 PKNOX1 GATA3 JUND POLR2A MUC16 ZNF561 BOLA3P2 TRQ-TTG8-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRQ-TTG8-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRQ-TTG8-1 Gene

Genomic Locations for TRQ-TTG8-1 Gene
chr19:9,039,680-9,039,752
(GRCh38/hg38)
Size:
73 bases
Orientation:
Minus strand
chr19:9,150,356-9,150,428
(GRCh37/hg19)
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRQ-TTG8-1 Gene

Genes around TRQ-TTG8-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRQ-TTG8-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRQ-TTG8-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRQ-TTG8-1 Gene

Proteins for TRQ-TTG8-1 Gene

Post-translational modifications for TRQ-TTG8-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRQ-TTG8-1 Gene

Domains & Families for TRQ-TTG8-1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRQ-TTG8-1 Gene

Function for TRQ-TTG8-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRQ-TTG8-1 Gene

Localization for TRQ-TTG8-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRQ-TTG8-1 Gene

Pathways & Interactions for TRQ-TTG8-1 Gene

PathCards logo

SuperPathways for TRQ-TTG8-1 Gene

No Data Available

Interacting Proteins for TRQ-TTG8-1 Gene

Gene Ontology (GO) - Biological Process for TRQ-TTG8-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRQ-TTG8-1 Gene

Drugs & Compounds for TRQ-TTG8-1 Gene

No Compound Related Data Available

Transcripts for TRQ-TTG8-1 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRQ-TTG8-1 Gene

No ASD Table

Relevant External Links for TRQ-TTG8-1 Gene

GeneLoc Exon Structure for
TRQ-TTG8-1
ECgene alternative splicing isoforms for
TRQ-TTG8-1

No data available for mRNA/cDNA for TRQ-TTG8-1 Gene

Expression for TRQ-TTG8-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRQ-TTG8-1 Gene

Orthologs for TRQ-TTG8-1 Gene

No data available for Orthologs and Evolution for TRQ-TTG8-1 Gene

Paralogs for TRQ-TTG8-1 Gene

No data available for Paralogs for TRQ-TTG8-1 Gene

Variants for TRQ-TTG8-1 Gene

Additional Variant Information for TRQ-TTG8-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRQ-TTG8-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRQ-TTG8-1 Gene

Disorders for TRQ-TTG8-1 Gene

No disorders were found for TRQ-TTG8-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRQ-TTG8-1 Gene

Publications for TRQ-TTG8-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

No data available for External Links for TRQ-TTG8-1 Gene

Products for TRQ-TTG8-1 Gene

Sources for TRQ-TTG8-1 Gene

Content
Loading form....