Aliases for TRQ-CTG1-1 Gene

Subcategory (RNA class) for TRQ-CTG1-1 Gene

tRNA

Number of RNA Genes sources:

3 / 14

Aliases for TRQ-CTG1-1 Gene

  • TRNA-Gln (Anticodon CTG) 1-1 2 3
  • Transfer RNA Glutamine 22 (Anticodon CUG) 2 3
  • Transfer RNA-Gln (CTG) 1-1 2 3
  • Transfer RNA-Gln (CTG) 1-3 2 3
  • TRNA-Gln-CTG-1-1 3 165
  • TRNA-Gln-CTG-1-3 3 165
  • TRQ-CTG1-3 2 3
  • TRNA-Gln-CTG-1-4 165
  • TRNA-Gln-CTG-1-5 165
  • TRNA-Gln-CTG-1-2 165
  • TRQ-CTG1-2 2
  • TRQ-CTG1-4 2
  • TRQ-CTG1-5 2
  • TRQ-CTG1-1 2
  • TRNAQ22 3
  • RF00005 172

External Ids for TRQ-CTG1-1 Gene

Previous HGNC Symbols for TRQ-CTG1-1 Gene

  • TRNAQ22
  • TRQ-CTG1-3

Previous GeneCards Identifiers for TRQ-CTG1-1 Gene

  • GC15M065870

Summaries for TRQ-CTG1-1 Gene

GeneCards Summary for TRQ-CTG1-1 Gene

TRQ-CTG1-1 (TRNA-Gln (Anticodon CTG) 1-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRQ-CTG1-1 Gene

Additional gene information for TRQ-CTG1-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRQ-CTG1-1 Gene

Genomics for TRQ-CTG1-1 Gene

GeneHancer (GH) Regulatory Elements for TRQ-CTG1-1 Gene

Promoters and enhancers for TRQ-CTG1-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J018827 Enhancer 0.3 Ensembl 0.4 -9.1 -9070 0.2 CREB1 PRDM1 TRQ-CTG1-1 piR-36378-004 piR-48950-173 lnc-RNF144B-3
GH06J018817 Enhancer 0.3 UCNEbase 0.4 -18.8 -18848 0.2 piR-36378-004 TRQ-CTG1-1 piR-48950-173 lnc-RNF144B-3
GH06J018762 Enhancer 0.3 ENCODE 0.2 -73.1 -73074 1 GATA3 RFX5 piR-48950-173 TRQ-CTG1-1 piR-36378-004 lnc-RNF144B-3
GH06J018778 Enhancer 0.2 FANTOM5 0.2 -57.6 -57577 0.1 piR-48950-173 piR-36378-004 TRQ-CTG1-1 lnc-RNF144B-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRQ-CTG1-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRQ-CTG1-1 Gene

Genomic Locations for TRQ-CTG1-1 Gene
chr6:18,836,171-18,836,242
(GRCh38/hg38)
Size:
72 bases
Orientation:
Plus strand
chr6:18,836,402-18,836,473
(GRCh37/hg19)
Size:
72 bases
Orientation:
Plus strand

Genomic View for TRQ-CTG1-1 Gene

Genes around TRQ-CTG1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRQ-CTG1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRQ-CTG1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRQ-CTG1-1 Gene

Proteins for TRQ-CTG1-1 Gene

Post-translational modifications for TRQ-CTG1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRQ-CTG1-1 Gene

Domains & Families for TRQ-CTG1-1 Gene

Gene Families for TRQ-CTG1-1 Gene

genes like me logo Genes that share domains with TRQ-CTG1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRQ-CTG1-1 Gene

Function for TRQ-CTG1-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRQ-CTG1-1 Gene

Localization for TRQ-CTG1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRQ-CTG1-1 Gene

Pathways & Interactions for TRQ-CTG1-1 Gene

PathCards logo

SuperPathways for TRQ-CTG1-1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for TRQ-CTG1-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRQ-CTG1-1 Gene

Drugs & Compounds for TRQ-CTG1-1 Gene

No Compound Related Data Available

Transcripts for TRQ-CTG1-1 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRQ-CTG1-1 Gene

No ASD Table

Relevant External Links for TRQ-CTG1-1 Gene

GeneLoc Exon Structure for
TRQ-CTG1-1

Expression for TRQ-CTG1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRQ-CTG1-1 Gene

Orthologs for TRQ-CTG1-1 Gene

No data available for Orthologs and Evolution for TRQ-CTG1-1 Gene

Paralogs for TRQ-CTG1-1 Gene

No data available for Paralogs for TRQ-CTG1-1 Gene

Variants for TRQ-CTG1-1 Gene

Additional Variant Information for TRQ-CTG1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRQ-CTG1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRQ-CTG1-1 Gene

Disorders for TRQ-CTG1-1 Gene

No disorders were found for TRQ-CTG1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRQ-CTG1-1 Gene

Publications for TRQ-CTG1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 54

Products for TRQ-CTG1-1 Gene

Sources for TRQ-CTG1-1 Gene