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Aliases for TRP-TGG5-1 Gene

Subcategory (RNA class) for TRP-TGG5-1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TRP-TGG5-1 Gene

  • Transfer RNA-Pro (TGG) 5-1 2 3
  • Transfer RNA Proline 27 (Anticodon UGG) Pseudogene 2 3
  • TRNA-Pro-TGG-5-1 3
  • TRNAP27P 3

External Ids for TRP-TGG5-1 Gene

Previous HGNC Symbols for TRP-TGG5-1 Gene

  • TRNAP27P

Summaries for TRP-TGG5-1 Gene

GeneCards Summary for TRP-TGG5-1 Gene

TRP-TGG5-1 (Transfer RNA-Pro (TGG) 5-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRP-TGG5-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRP-TGG5-1 Gene

Genomics for TRP-TGG5-1 Gene

GeneHancer (GH) Regulatory Elements for TRP-TGG5-1 Gene

Promoters and enhancers for TRP-TGG5-1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I207004 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.8 -2.9 -2919 7.1 HDGF PKNOX1 ARNT ARID4B SIN3A ZNF2 IRF4 ZNF766 ZNF143 DEK PIGR FCMR FCAMR IL24 IL20 PFKFB2 MAPKAPK2 IL19 C4BPB TRP-TGG5-1
GH01I207001 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.8 +2.2 2217 2.4 MAX ZBTB40 RFX5 GATA3 POLR2A SMARCC2 RCOR1 PRDM10 DEK TCF7L2 C4BPB TRP-TGG5-1 FCAMR
GH01I207000 Enhancer 0.7 ENCODE dbSUPER 0.8 +3.8 3841 0.2 SREBF1 MEIS2 TCF12 PKNOX1 CBFA2T3 CBFA2T2 TRP-TGG5-1 FCAMR
GH01I206966 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 0.3 +34.0 34027 7.9 HDAC1 BATF IRF4 RAD21 YY1 ETV6 ATF7 IKZF2 RUNX3 SMARCA5 FCAMR PIGR FCMR IL20 IL24 IL10 IL19 MAPKAPK2 ENSG00000271680 C1orf116
GH01I206992 Enhancer 0.7 ENCODE dbSUPER 0.4 +12.0 11968 1.3 HNF1A HMBOX1 ZBTB33 TEAD3 FCAMR PIGR IL20 C1orf116 C4BPA ENSG00000271680 TRP-TGG5-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRP-TGG5-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRP-TGG5-1 Gene

Genomic Locations for TRP-TGG5-1 Gene
77 bases
Minus strand

Genomic View for TRP-TGG5-1 Gene

Genes around TRP-TGG5-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRP-TGG5-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRP-TGG5-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRP-TGG5-1 Gene

Proteins for TRP-TGG5-1 Gene

Post-translational modifications for TRP-TGG5-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRP-TGG5-1 Gene

Domains & Families for TRP-TGG5-1 Gene

Gene Families for TRP-TGG5-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRP-TGG5-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRP-TGG5-1 Gene

Function for TRP-TGG5-1 Gene

Phenotypes From GWAS Catalog for TRP-TGG5-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRP-TGG5-1 Gene

Localization for TRP-TGG5-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRP-TGG5-1 Gene

Pathways & Interactions for TRP-TGG5-1 Gene

SuperPathways for TRP-TGG5-1 Gene

No Data Available

Interacting Proteins for TRP-TGG5-1 Gene

Gene Ontology (GO) - Biological Process for TRP-TGG5-1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TRP-TGG5-1 Gene

Drugs & Compounds for TRP-TGG5-1 Gene

No Compound Related Data Available

Transcripts for TRP-TGG5-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRP-TGG5-1 Gene

No ASD Table

Relevant External Links for TRP-TGG5-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for TRP-TGG5-1 Gene

Expression for TRP-TGG5-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRP-TGG5-1 Gene

Orthologs for TRP-TGG5-1 Gene

No data available for Orthologs and Evolution for TRP-TGG5-1 Gene

Paralogs for TRP-TGG5-1 Gene

No data available for Paralogs for TRP-TGG5-1 Gene

Variants for TRP-TGG5-1 Gene

Additional Variant Information for TRP-TGG5-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRP-TGG5-1 Gene

Disorders for TRP-TGG5-1 Gene

No disorders were found for TRP-TGG5-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRP-TGG5-1 Gene

Publications for TRP-TGG5-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRP-TGG5-1 Gene

Sources for TRP-TGG5-1 Gene

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