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Aliases for TRP-CGG1-2 Gene

Subcategory (RNA class) for TRP-CGG1-2 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRP-CGG1-2 Gene

  • Transfer RNA-Pro (CGG) 1-2 2 3
  • Transfer RNA Proline 12 (Anticodon CGG) 2 3
  • TRNA-Pro-CGG-1-2 3
  • TRNAP12 3

External Ids for TRP-CGG1-2 Gene

Previous HGNC Symbols for TRP-CGG1-2 Gene

  • TRNAP12

Previous GeneCards Identifiers for TRP-CGG1-2 Gene

  • GC16P003176
  • GC16P003226
  • GC16P003237
  • GC16P003296
  • GC16P003341
  • GC16P003394
  • GC16P003431

Summaries for TRP-CGG1-2 Gene

GeneCards Summary for TRP-CGG1-2 Gene

TRP-CGG1-2 (Transfer RNA-Pro (CGG) 1-2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRP-CGG1-2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRP-CGG1-2 Gene

Genomics for TRP-CGG1-2 Gene

GeneHancer (GH) Regulatory Elements for TRP-CGG1-2 Gene

Promoters and enhancers for TRP-CGG1-2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I003171 Enhancer 1.3 Ensembl ENCODE dbSUPER 550.8 0.0 -47 1.6 PKNOX1 ATF1 SIN3A ZNF2 GTF3C2 RUNX3 KLF13 SP3 REST TSHZ1 TRP-CGG1-2 TRP-TGG4-1 ZNF205 ZNF75A RNPS1 MTCO1P28 PDPK2P TIGD7 PDPK1 CLUAP1
GH16I003170 Enhancer 0.6 ENCODE 550.8 -1.3 -1303 0.2 ELF3 SAP130 SIN3A DMAP1 REST ELF1 SLC30A9 EZH2 TRP-CGG1-2 TRP-TGG4-1 GC16P003514
GH16I003172 Enhancer 0.6 ENCODE 550.8 -1.1 -1075 0.3 ELF3 TFAP4 ZNF449 SUZ12 BACH1 SIN3A DMAP1 REST ELF1 EZH2 TRP-CGG1-2 TRP-TGG4-1 GC16P003514
GH16I003174 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.8 +3.4 3353 1.2 ATF1 ARNT ARID4B SIN3A ZNF2 GTF3C2 GLIS2 ZNF213 KLF7 FOS GC16P003512 PIR75204 TRK-CTT2-5 ZNF205 ZNF75A E4F1 RNPS1 PDPK2P PDPK1 ABCA17P
GH16I003173 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.8 +2.2 2174 1 HDAC1 ARID4B RAD21 ZNF48 GTF3C2 ZNF335 ZNF143 RUNX3 SMARCA5 CEBPB GC16P003512 PIR75204 TRK-CTT2-5 TRP-CGG1-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRP-CGG1-2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRP-CGG1-2 Gene

Genomic Locations for TRP-CGG1-2 Gene
chr16:3,172,048-3,172,119
(GRCh38/hg38)
Size:
72 bases
Orientation:
Plus strand
chr16:3,222,049-3,222,120
(GRCh37/hg19)

Genomic View for TRP-CGG1-2 Gene

Genes around TRP-CGG1-2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRP-CGG1-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRP-CGG1-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRP-CGG1-2 Gene

Proteins for TRP-CGG1-2 Gene

Post-translational modifications for TRP-CGG1-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRP-CGG1-2 Gene

Domains & Families for TRP-CGG1-2 Gene

Gene Families for TRP-CGG1-2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRP-CGG1-2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRP-CGG1-2 Gene

Function for TRP-CGG1-2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRP-CGG1-2 Gene

Localization for TRP-CGG1-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRP-CGG1-2 Gene

Pathways & Interactions for TRP-CGG1-2 Gene

SuperPathways for TRP-CGG1-2 Gene

No Data Available

Interacting Proteins for TRP-CGG1-2 Gene

Gene Ontology (GO) - Biological Process for TRP-CGG1-2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRP-CGG1-2 Gene

Drugs & Compounds for TRP-CGG1-2 Gene

No Compound Related Data Available

Transcripts for TRP-CGG1-2 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRP-CGG1-2 Gene

No ASD Table

Relevant External Links for TRP-CGG1-2 Gene

GeneLoc Exon Structure for
TRP-CGG1-2
ECgene alternative splicing isoforms for
TRP-CGG1-2

No data available for mRNA/cDNA for TRP-CGG1-2 Gene

Expression for TRP-CGG1-2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRP-CGG1-2 Gene

Orthologs for TRP-CGG1-2 Gene

No data available for Orthologs and Evolution for TRP-CGG1-2 Gene

Paralogs for TRP-CGG1-2 Gene

No data available for Paralogs for TRP-CGG1-2 Gene

Variants for TRP-CGG1-2 Gene

Additional Variant Information for TRP-CGG1-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRP-CGG1-2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRP-CGG1-2 Gene

Disorders for TRP-CGG1-2 Gene

No disorders were found for TRP-CGG1-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRP-CGG1-2 Gene

Publications for TRP-CGG1-2 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRP-CGG1-2 Gene

Sources for TRP-CGG1-2 Gene

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