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Aliases for TRN-GTT2-6 Gene

Subcategory (RNA class) for TRN-GTT2-6 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for TRN-GTT2-6 Gene

  • Transfer RNA-Asn (GTT) 2-6 2 3
  • Transfer RNA Asparagine 20 (Anticodon GUU) 2 3
  • TRNA-Asn-GTT-2-6 3
  • TRNAN20 3

External Ids for TRN-GTT2-6 Gene

Previous HGNC Symbols for TRN-GTT2-6 Gene

  • TRNAN20

Previous GeneCards Identifiers for TRN-GTT2-6 Gene

  • GC19P001396
  • GC19P001400
  • GC19P001405
  • GC19P001409
  • GC19P001412
  • GC19P001418
  • GC19P001421
  • GC19P001424

Summaries for TRN-GTT2-6 Gene

GeneCards Summary for TRN-GTT2-6 Gene

TRN-GTT2-6 (Transfer RNA-Asn (GTT) 2-6) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRN-GTT2-6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRN-GTT2-6 Gene

Genomics for TRN-GTT2-6 Gene

GeneHancer (GH) Regulatory Elements for TRN-GTT2-6 Gene

Promoters and enhancers for TRN-GTT2-6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J001382 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 650.7 +0.5 463 2.2 MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NDUFS7 TRF-GAA1-6 TRN-GTT2-6 PIR60227 PIR43938 SF3A2 CIRBP TMEM259 DAZAP1 LOC100288123
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRN-GTT2-6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRN-GTT2-6 Gene

Genomic Locations for TRN-GTT2-6 Gene
chr19:1,383,563-1,383,636
(GRCh38/hg38)
Size:
74 bases
Orientation:
Plus strand
chr19:1,383,562-1,383,635
(GRCh37/hg19)
Size:
74 bases
Orientation:
Plus strand

Genomic View for TRN-GTT2-6 Gene

Genes around TRN-GTT2-6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRN-GTT2-6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRN-GTT2-6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRN-GTT2-6 Gene

Proteins for TRN-GTT2-6 Gene

Post-translational modifications for TRN-GTT2-6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRN-GTT2-6 Gene

Domains & Families for TRN-GTT2-6 Gene

Gene Families for TRN-GTT2-6 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRN-GTT2-6: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRN-GTT2-6 Gene

Function for TRN-GTT2-6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRN-GTT2-6 Gene

Localization for TRN-GTT2-6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRN-GTT2-6 Gene

Pathways & Interactions for TRN-GTT2-6 Gene

SuperPathways for TRN-GTT2-6 Gene

No Data Available

Interacting Proteins for TRN-GTT2-6 Gene

Gene Ontology (GO) - Biological Process for TRN-GTT2-6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRN-GTT2-6 Gene

Drugs & Compounds for TRN-GTT2-6 Gene

No Compound Related Data Available

Transcripts for TRN-GTT2-6 Gene

mRNA/cDNA for TRN-GTT2-6 Gene

(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRN-GTT2-6 Gene

No ASD Table

Relevant External Links for TRN-GTT2-6 Gene

GeneLoc Exon Structure for
TRN-GTT2-6
ECgene alternative splicing isoforms for
TRN-GTT2-6

Expression for TRN-GTT2-6 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRN-GTT2-6 Gene

Orthologs for TRN-GTT2-6 Gene

No data available for Orthologs and Evolution for TRN-GTT2-6 Gene

Paralogs for TRN-GTT2-6 Gene

No data available for Paralogs for TRN-GTT2-6 Gene

Variants for TRN-GTT2-6 Gene

Additional Variant Information for TRN-GTT2-6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRN-GTT2-6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRN-GTT2-6 Gene

Disorders for TRN-GTT2-6 Gene

No disorders were found for TRN-GTT2-6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRN-GTT2-6 Gene

Publications for TRN-GTT2-6 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRN-GTT2-6 Gene

Sources for TRN-GTT2-6 Gene

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