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Aliases for TRMT112P3 Gene

Subcategory (RNA class) for TRMT112P3 Gene

lncRNA

Aliases for TRMT112P3 Gene

  • TRNA Methyltransferase Subunit 11-2 Pseudogene 3 2 3 5
  • TRNA Methyltransferase 11-2 Homolog (S. Cerevisiae) Pseudogene 3 2

External Ids for TRMT112P3 Gene

ORGUL Members for TRMT112P3 Gene

Previous GeneCards Identifiers for TRMT112P3 Gene

  • GC17M061029

Summaries for TRMT112P3 Gene

GeneCards Summary for TRMT112P3 Gene

TRMT112P3 (TRNA Methyltransferase Subunit 11-2 Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for TRMT112P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRMT112P3 Gene

Genomics for TRMT112P3 Gene

GeneHancer (GH) Regulatory Elements for TRMT112P3 Gene

Promoters and enhancers for TRMT112P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I062949 Enhancer 0.8 ENCODE 550.8 +1.1 1083 1 NFIB INSM2 MZF1 RCOR1 KLF7 HCFC1 GATAD2B ZNF217 ZNF512B ZNF610 TRMT112P3 MIR633 ENSG00000283538
GH17I062963 Enhancer 0.7 ENCODE 0.4 -12.2 -12166 0.5 NFRKB JUN MAX NFXL1 FOSL1 POLR2A ADNP RCOR1 FOSL2 FOS CYB561 ENSG00000265971 TANC2 ENSG00000283538 TRMT112P3
GH17I062962 Enhancer 0.5 ENCODE 0.4 -11.8 -11827 0.2 ZNF366 ZNF512 NFRKB NFXL1 BCLAF1 TANC2 ENSG00000283538 TRMT112P3
GH17I062966 Enhancer 0.3 ENCODE 0.4 -13.0 -13012 0 ADNP ENSG00000283538 TANC2 TRMT112P3
GH17I062967 Enhancer 0.3 ENCODE 0.4 -12.7 -12687 0.2 ADNP ENSG00000283538 TANC2 TRMT112P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRMT112P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRMT112P3 Gene

Genomic Locations for TRMT112P3 Gene
chr17:62,950,664-62,951,188
(GRCh38/hg38)
Size:
525 bases
Orientation:
Minus strand
chr17:61,028,025-61,028,549
(GRCh37/hg19)

Genomic View for TRMT112P3 Gene

Genes around TRMT112P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRMT112P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRMT112P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRMT112P3 Gene

Proteins for TRMT112P3 Gene

Post-translational modifications for TRMT112P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRMT112P3 Gene

Domains & Families for TRMT112P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRMT112P3 Gene

Function for TRMT112P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRMT112P3 Gene

Localization for TRMT112P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRMT112P3 Gene

Pathways & Interactions for TRMT112P3 Gene

SuperPathways for TRMT112P3 Gene

No Data Available

Interacting Proteins for TRMT112P3 Gene

Gene Ontology (GO) - Biological Process for TRMT112P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRMT112P3 Gene

Drugs & Compounds for TRMT112P3 Gene

No Compound Related Data Available

Transcripts for TRMT112P3 Gene

mRNA/cDNA for TRMT112P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRMT112P3 Gene

No ASD Table

Relevant External Links for TRMT112P3 Gene

GeneLoc Exon Structure for
TRMT112P3
ECgene alternative splicing isoforms for
TRMT112P3

Expression for TRMT112P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRMT112P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of TRMT112P3 Gene:

TRMT112P3
genes like me logo Genes that share expression patterns with TRMT112P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRMT112P3 Gene

Orthologs for TRMT112P3 Gene

Evolution for TRMT112P3 Gene

ENSEMBL:
Gene Tree for TRMT112P3 (if available)
TreeFam:
Gene Tree for TRMT112P3 (if available)

No data available for Orthologs for TRMT112P3 Gene

Paralogs for TRMT112P3 Gene

No data available for Paralogs for TRMT112P3 Gene

Variants for TRMT112P3 Gene

Additional Variant Information for TRMT112P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRMT112P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRMT112P3 Gene

Disorders for TRMT112P3 Gene

No disorders were found for TRMT112P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRMT112P3 Gene

Publications for TRMT112P3 Gene

No publications were found for TRMT112P3 Gene.

Products for TRMT112P3 Gene

Sources for TRMT112P3 Gene

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