Aliases for TRMT112P3 Gene

Aliases for TRMT112P3 Gene

  • TRNA Methyltransferase Subunit 11-2 Pseudogene 3 2 3 5
  • TRNA Methyltransferase 11-2 Homolog (S. Cerevisiae) Pseudogene 3 2
  • TRNA Methyltransferase 11-2 Homolog Pseudogene 3 3
  • TRMT112P3 5

External Ids for TRMT112P3 Gene

Previous GeneCards Identifiers for TRMT112P3 Gene

  • GC17M061029

Summaries for TRMT112P3 Gene

GeneCards Summary for TRMT112P3 Gene

TRMT112P3 (TRNA Methyltransferase Subunit 11-2 Pseudogene 3) is a Pseudogene.

Additional gene information for TRMT112P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TRMT112P3 Gene

Genomics for TRMT112P3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TRMT112P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J062949 Enhancer 0.9 Ensembl ENCODE 250.7 +1.1 1083 1 IKZF1 ZIC2 DEK KLF7 ZNF217 MBD2 CTBP1 ZNF610 CUX1 ZNF146 TRMT112P3 lnc-MARCH10-6 MIR633 TANC2 ENSG00000283538 MARCHF10
GH17J062962 Enhancer 0.8 Ensembl ENCODE 0.4 -12.4 -12392 1.3 IKZF1 JUND MAX EP300 STAT3 SMARCA4 GATA2 DPF2 ARID1B JUNB CYB561 ENSG00000265971 TANC2 ENSG00000283538 lnc-MARCH10-6 TRMT112P3 MARCHF10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRMT112P3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRMT112P3 Gene

Latest Assembly
chr17:62,950,659-62,951,188
(GRCh38/hg38)
Size:
530 bases
Orientation:
Minus strand

Previous Assembly
chr17:61,028,020-61,028,549
(GRCh37/hg19 by Entrez Gene)
Size:
530 bases
Orientation:
Minus strand

chr17:61,028,192-61,028,549
(GRCh37/hg19 by Ensembl)
Size:
358 bases
Orientation:
Minus strand

Genomic View for TRMT112P3 Gene

Genes around TRMT112P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRMT112P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRMT112P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRMT112P3 Gene

Proteins for TRMT112P3 Gene

Post-translational modifications for TRMT112P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRMT112P3 Gene

Domains & Families for TRMT112P3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRMT112P3 Gene

Function for TRMT112P3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRMT112P3 Gene

Localization for TRMT112P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRMT112P3 Gene

Pathways & Interactions for TRMT112P3 Gene

PathCards logo

SuperPathways for TRMT112P3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRMT112P3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRMT112P3 Gene

Drugs & Compounds for TRMT112P3 Gene

No Compound Related Data Available

Transcripts for TRMT112P3 Gene

mRNA/cDNA for TRMT112P3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRMT112P3 Gene

No ASD Table

Relevant External Links for TRMT112P3 Gene

GeneLoc Exon Structure for
TRMT112P3

Expression for TRMT112P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRMT112P3 Gene

genes like me logo Genes that share expression patterns with TRMT112P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRMT112P3 Gene

Orthologs for TRMT112P3 Gene

Evolution for TRMT112P3 Gene

ENSEMBL:
Gene Tree for TRMT112P3 (if available)
TreeFam:
Gene Tree for TRMT112P3 (if available)
Alliance of Genome Resources:
Additional Orthologs for TRMT112P3

No data available for Orthologs for TRMT112P3 Gene

Paralogs for TRMT112P3 Gene

No data available for Paralogs for TRMT112P3 Gene

Variants for TRMT112P3 Gene

Additional Variant Information for TRMT112P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRMT112P3
Leiden Open Variation Database (LOVD)
TRMT112P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRMT112P3 Gene

Disorders for TRMT112P3 Gene

No disorders were found for TRMT112P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRMT112P3 Gene

Publications for TRMT112P3 Gene

No publications were found for TRMT112P3 Gene.

No data available for Mastermind for TRMT112P3 Gene

Products for TRMT112P3 Gene

Sources for TRMT112P3 Gene