TRM-CAT7-1 Gene (RNA Gene)

TRNA-Met (Anticodon CAT) 7-1

GC06M057844
GIFtS:
5
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Aliases for TRM-CAT7-1 Gene

Subcategory (RNA class) for TRM-CAT7-1 Gene

tRNA

Number of RNA Genes sources:

3 / 17

Aliases for TRM-CAT7-1 Gene

  • TRNA-Met (Anticodon CAT) 7-1 2 3
  • Transfer RNA Methionine 5 (Anticodon CAU) 2 3
  • Transfer RNA-Met (CAT) 7-1 2 3
  • TRNA-Met-CAT-7-1 2 162
  • TRNA-Met (CAT) 7-1 3
  • TRM-CAT7-1 2
  • RF00005 168
  • TRNAM5 3

External Ids for TRM-CAT7-1 Gene

Previous HGNC Symbols for TRM-CAT7-1 Gene

  • TRNAM5

Summaries for TRM-CAT7-1 Gene

GeneCards Summary for TRM-CAT7-1 Gene

TRM-CAT7-1 (TRNA-Met (Anticodon CAT) 7-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRM-CAT7-1 Gene

Additional gene information for TRM-CAT7-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRM-CAT7-1 Gene

Genomics for TRM-CAT7-1 Gene

Genomic Locations for TRM-CAT7-1 Gene

Genomic Locations for TRM-CAT7-1 Gene
chr6:57,842,214-57,842,286
(GRCh38/hg38)
Size:
73 bases
Orientation:
Minus strand
chr6:58,168,492-58,168,564
(GRCh37/hg19)
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRM-CAT7-1 Gene

Genes around TRM-CAT7-1 on UCSC Golden Path with GeneCards custom track
TRM-CAT7-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
TRM-CAT7-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRM-CAT7-1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TRM-CAT7-1 Gene

No data available for GeneHancer (GH) Regulatory Elements for TRM-CAT7-1 Gene

Proteins for TRM-CAT7-1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TRM-CAT7-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRM-CAT7-1 Gene

Domains & Families for TRM-CAT7-1 Gene

Gene Families for TRM-CAT7-1 Gene

HGNC:
genes like me logo Genes that share domains with TRM-CAT7-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRM-CAT7-1 Gene

Function for TRM-CAT7-1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRM-CAT7-1 Gene

Localization for TRM-CAT7-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRM-CAT7-1 Gene

Pathways & Interactions for TRM-CAT7-1 Gene

PathCards logo

SuperPathways for TRM-CAT7-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRM-CAT7-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRM-CAT7-1 Gene

Drugs & Compounds for TRM-CAT7-1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TRM-CAT7-1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRM-CAT7-1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000065DEBF_9606 tRNA 73 4

HGNC: 34645,

GtRNAdb: tRNA-Met-CAT-7-1:CM000668.1:58168492-58168564, tRNA-Met-CAT-7-1:CM000668.2:57842214-57842286,

Rfam: RF00005,

ENA: HG983959.1:1..73:tRNA,

TRM-CAT7-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRM-CAT7-1 Gene

No ASD Table

Relevant External Links for TRM-CAT7-1 Gene

GeneLoc Exon Structure for
TRM-CAT7-1

No data available for mRNA/cDNA for TRM-CAT7-1 Gene

Expression for TRM-CAT7-1 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRM-CAT7-1 Gene

Orthologs for TRM-CAT7-1 Gene

No data available for Orthologs and Evolution for TRM-CAT7-1 Gene

Paralogs for TRM-CAT7-1 Gene

No data available for Paralogs for TRM-CAT7-1 Gene

Variants for TRM-CAT7-1 Gene

Additional Variant Information for TRM-CAT7-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRM-CAT7-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRM-CAT7-1 Gene

Disorders for TRM-CAT7-1 Gene

No disorders were found for TRM-CAT7-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRM-CAT7-1 Gene

Publications for TRM-CAT7-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3

No data available for Mastermind for TRM-CAT7-1 Gene

Products for TRM-CAT7-1 Gene

Sources for TRM-CAT7-1 Gene