Aliases for TRM-CAT3-2 Gene

Subcategory (RNA class) for TRM-CAT3-2 Gene

tRNA

Number of RNA Genes sources:

3 / 17

Aliases for TRM-CAT3-2 Gene

  • TRNA-Met (Anticodon CAT) 3-2 2 3
  • Transfer RNA Methionine 8 (Anticodon CAU) 2 3
  • Transfer RNA-Met (CAT) 3-2 2 3
  • TRNA-Met-CAT-3-2 2 162
  • TRNA-Met (CAT) 3-2 3
  • TRNA-Met-CAT-3-1 162
  • TRM-CAT3-2 2
  • TRM-CAT3-1 2
  • RF00005 168
  • TRNAM8 3

External Ids for TRM-CAT3-2 Gene

Previous HGNC Symbols for TRM-CAT3-2 Gene

  • TRNAM8

Summaries for TRM-CAT3-2 Gene

GeneCards Summary for TRM-CAT3-2 Gene

TRM-CAT3-2 (TRNA-Met (Anticodon CAT) 3-2) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRM-CAT3-2 Gene

Additional gene information for TRM-CAT3-2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRM-CAT3-2 Gene

Genomics for TRM-CAT3-2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TRM-CAT3-2 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRM-CAT3-2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRM-CAT3-2 Gene

Genomic Locations for TRM-CAT3-2 Gene
chr6:28,953,265-28,953,337
(GRCh38/hg38)
Size:
73 bases
Orientation:
Minus strand
chr6:28,921,042-28,921,114
(GRCh37/hg19)
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRM-CAT3-2 Gene

Genes around TRM-CAT3-2 on UCSC Golden Path with GeneCards custom track
TRM-CAT3-2 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
TRM-CAT3-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRM-CAT3-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRM-CAT3-2 Gene

Proteins for TRM-CAT3-2 Gene

Post-translational modifications for TRM-CAT3-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRM-CAT3-2 Gene

Domains & Families for TRM-CAT3-2 Gene

Gene Families for TRM-CAT3-2 Gene

genes like me logo Genes that share domains with TRM-CAT3-2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRM-CAT3-2 Gene

Function for TRM-CAT3-2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRM-CAT3-2 Gene

Localization for TRM-CAT3-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRM-CAT3-2 Gene

Pathways & Interactions for TRM-CAT3-2 Gene

PathCards logo

SuperPathways for TRM-CAT3-2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRM-CAT3-2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRM-CAT3-2 Gene

Drugs & Compounds for TRM-CAT3-2 Gene

No Compound Related Data Available

Transcripts for TRM-CAT3-2 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRM-CAT3-2 Gene

TRM-CAT3-2 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRM-CAT3-2 Gene

No ASD Table

Relevant External Links for TRM-CAT3-2 Gene

GeneLoc Exon Structure for
TRM-CAT3-2

No data available for mRNA/cDNA for TRM-CAT3-2 Gene

Expression for TRM-CAT3-2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRM-CAT3-2 Gene

Orthologs for TRM-CAT3-2 Gene

No data available for Orthologs and Evolution for TRM-CAT3-2 Gene

Paralogs for TRM-CAT3-2 Gene

No data available for Paralogs for TRM-CAT3-2 Gene

Variants for TRM-CAT3-2 Gene

Additional Variant Information for TRM-CAT3-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRM-CAT3-2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRM-CAT3-2 Gene

Disorders for TRM-CAT3-2 Gene

No disorders were found for TRM-CAT3-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRM-CAT3-2 Gene

Publications for TRM-CAT3-2 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3

No data available for Mastermind for TRM-CAT3-2 Gene

Products for TRM-CAT3-2 Gene

Sources for TRM-CAT3-2 Gene