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Aliases for TRL-TAG3-1 Gene

Subcategory (RNA class) for TRL-TAG3-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRL-TAG3-1 Gene

  • Transfer RNA-Leu (TAG) 3-1 2 3
  • Transfer RNA Leucine 7 (Anticodon UAG) 2 3
  • TRNA-Leu-TAG-3-1 3
  • TRNAL7 3

External Ids for TRL-TAG3-1 Gene

ORGUL Members for TRL-TAG3-1 Gene

Previous HGNC Symbols for TRL-TAG3-1 Gene

  • TRNAL7

Summaries for TRL-TAG3-1 Gene

GeneCards Summary for TRL-TAG3-1 Gene

TRL-TAG3-1 (Transfer RNA-Leu (TAG) 3-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRL-TAG3-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRL-TAG3-1 Gene

Genomics for TRL-TAG3-1 Gene

GeneHancer (GH) Regulatory Elements for TRL-TAG3-1 Gene

Promoters and enhancers for TRL-TAG3-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I022194 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +0.1 92 2.2 HDGF MLX ZFP64 ARID4B SIN3A DMAP1 YBX1 ZNF2 ZBTB7B IRF4 GC16M022196 TRL-TAG3-1 NPIPB3 C16orf52 NPIPB4 NPIPB5 SMG1P3 SMG1P4 SMG1P1 ENSG00000260635
GH16I022187 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.8 +4.9 4922 6.5 HDGF PKNOX1 FOXA2 SMAD1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 GC16P022190 POLR3E PDZD9 ENSG00000260306 UQCRC2 NPIPB5 ENSG00000260973 NPIPB3 MFSD13B NPIPB4
GH16I022198 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.8 -3.8 -3833 2 DRAP1 CTCF ZNF792 SAP130 MLX ZNF449 KLF17 ZNF644 RAD21 DNMT3B ENSG00000260306 GC16M022196 TRL-TAG3-1 EEF2K
GH16I022201 Enhancer 1 ENCODE dbSUPER 0.4 -6.1 -6102 1.3 CLOCK BMI1 ZBTB40 ZNF366 SCRT2 ZNF416 YY2 USF2 ZEB2 ZFP69B MFSD13B EEF2K GC16M022196 TRL-TAG3-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRL-TAG3-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRL-TAG3-1 Gene

Genomic Locations for TRL-TAG3-1 Gene
chr16:22,195,711-22,195,792
(GRCh38/hg38)
Size:
82 bases
Orientation:
Minus strand
chr16:22,207,032-22,207,113
(GRCh37/hg19)

Genomic View for TRL-TAG3-1 Gene

Genes around TRL-TAG3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRL-TAG3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRL-TAG3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRL-TAG3-1 Gene

Proteins for TRL-TAG3-1 Gene

Post-translational modifications for TRL-TAG3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRL-TAG3-1 Gene

Domains & Families for TRL-TAG3-1 Gene

Gene Families for TRL-TAG3-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRL-TAG3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRL-TAG3-1 Gene

Function for TRL-TAG3-1 Gene

Phenotypes From GWAS Catalog for TRL-TAG3-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRL-TAG3-1 Gene

Localization for TRL-TAG3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRL-TAG3-1 Gene

Pathways & Interactions for TRL-TAG3-1 Gene

SuperPathways for TRL-TAG3-1 Gene

No Data Available

Interacting Proteins for TRL-TAG3-1 Gene

Gene Ontology (GO) - Biological Process for TRL-TAG3-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRL-TAG3-1 Gene

Drugs & Compounds for TRL-TAG3-1 Gene

No Compound Related Data Available

Transcripts for TRL-TAG3-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRL-TAG3-1 Gene

No ASD Table

Relevant External Links for TRL-TAG3-1 Gene

GeneLoc Exon Structure for
TRL-TAG3-1
ECgene alternative splicing isoforms for
TRL-TAG3-1

No data available for mRNA/cDNA for TRL-TAG3-1 Gene

Expression for TRL-TAG3-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRL-TAG3-1 Gene

Orthologs for TRL-TAG3-1 Gene

No data available for Orthologs and Evolution for TRL-TAG3-1 Gene

Paralogs for TRL-TAG3-1 Gene

No data available for Paralogs for TRL-TAG3-1 Gene

Variants for TRL-TAG3-1 Gene

Additional Variant Information for TRL-TAG3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRL-TAG3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRL-TAG3-1 Gene

Disorders for TRL-TAG3-1 Gene

No disorders were found for TRL-TAG3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRL-TAG3-1 Gene

Publications for TRL-TAG3-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRL-TAG3-1 Gene

Sources for TRL-TAG3-1 Gene

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