Aliases for TRL-CAA7-1 Gene

Aliases for TRL-CAA7-1 Gene

  • TRNA-Leu (CAA) 7-1 2 3
  • Transfer RNA Leucine 44 (Anticodon CAA) Pseudogene 2 3
  • Transfer RNA-Leu (CAA) 7-1 2 3
  • TRNAL44P 3

External Ids for TRL-CAA7-1 Gene

Previous HGNC Symbols for TRL-CAA7-1 Gene

  • TRNAL44P

Previous GeneCards Identifiers for TRL-CAA7-1 Gene

  • GC10U902350

Summaries for TRL-CAA7-1 Gene

GeneCards Summary for TRL-CAA7-1 Gene

TRL-CAA7-1 (TRNA-Leu (CAA) 7-1) is a Pseudogene.

Additional gene information for TRL-CAA7-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TRL-CAA7-1 Gene

Genomics for TRL-CAA7-1 Gene

GeneHancer (GH) Regulatory Elements for TRL-CAA7-1 Gene

Promoters and enhancers for TRL-CAA7-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J034297 Enhancer 0.9 Ensembl ENCODE 0.6 +3.9 3855 3 RBPJ MIXL1 ELF3 SP1 ZNF644 ZBTB33 RXRA GATAD2A POLR2A IRF2 NRP1 HG983888 TRL-CAA7-1 piR-33270-004 PARD3
GH10J034305 Enhancer 0.8 Ensembl ENCODE 0.6 -2.9 -2916 0.9 TCF7L2 MNT IKZF1 CREB1 TARDBP IKZF2 CTBP1 PKNOX1 ZNF592 DPF2 NRP1 HG983888 TRL-CAA7-1 piR-48773-004 PARD3
GH10J034318 Enhancer 1 Ensembl ENCODE 0.4 -17.3 -17341 2.2 ZNF217 ZNF362 MNT BCL6B CEBPG SP7 ZSCAN21 PKNOX1 CEBPA ZBTB8A TRL-CAA7-1 HG983888 piR-48773-004 PARD3
GH10J034289 Enhancer 0.8 Ensembl ENCODE 0.4 +9.8 9826 6.1 HLF MAFK ZNF644 POLR2A CEBPA RXRA IKZF2 SP1 CEBPB PKNOX1 NRP1 HG983888 TRL-CAA7-1 piR-33270-004 PARD3
GH10J034288 Enhancer 0.7 Ensembl ENCODE 0.4 +13.8 13754 0.8 CEBPA CEBPB JUND SP1 EP300 STAT3 TCF7L2 FOSL2 FOS ZBTB40 NRP1 piR-33270-004 TRL-CAA7-1 HG983888 PARD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRL-CAA7-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRL-CAA7-1 Gene

Genomic Locations for TRL-CAA7-1 Gene
chr10:34,302,488-34,302,555
(GRCh38/hg38)
Size:
68 bases
Orientation:
Minus strand

Genomic View for TRL-CAA7-1 Gene

Genes around TRL-CAA7-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRL-CAA7-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRL-CAA7-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRL-CAA7-1 Gene

Proteins for TRL-CAA7-1 Gene

Post-translational modifications for TRL-CAA7-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRL-CAA7-1 Gene

Domains & Families for TRL-CAA7-1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRL-CAA7-1 Gene

Function for TRL-CAA7-1 Gene

Phenotypes From GWAS Catalog for TRL-CAA7-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRL-CAA7-1 Gene

Localization for TRL-CAA7-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRL-CAA7-1 Gene

Pathways & Interactions for TRL-CAA7-1 Gene

PathCards logo

SuperPathways for TRL-CAA7-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRL-CAA7-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRL-CAA7-1 Gene

Drugs & Compounds for TRL-CAA7-1 Gene

No Compound Related Data Available

Transcripts for TRL-CAA7-1 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRL-CAA7-1 Gene

No ASD Table

Relevant External Links for TRL-CAA7-1 Gene

GeneLoc Exon Structure for
TRL-CAA7-1
ECgene alternative splicing isoforms for
TRL-CAA7-1

No data available for mRNA/cDNA for TRL-CAA7-1 Gene

Expression for TRL-CAA7-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRL-CAA7-1 Gene

Orthologs for TRL-CAA7-1 Gene

No data available for Orthologs and Evolution for TRL-CAA7-1 Gene

Paralogs for TRL-CAA7-1 Gene

No data available for Paralogs for TRL-CAA7-1 Gene

Variants for TRL-CAA7-1 Gene

Additional Variant Information for TRL-CAA7-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRL-CAA7-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRL-CAA7-1 Gene

Disorders for TRL-CAA7-1 Gene

No disorders were found for TRL-CAA7-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRL-CAA7-1 Gene

Publications for TRL-CAA7-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 56

No data available for External Links for TRL-CAA7-1 Gene

Products for TRL-CAA7-1 Gene

Sources for TRL-CAA7-1 Gene