Aliases for TRL-CAA3-1 Gene

Subcategory (RNA class) for TRL-CAA3-1 Gene

tRNA

Number of RNA Genes sources:

3 / 17

Aliases for TRL-CAA3-1 Gene

  • TRNA-Leu (Anticodon CAA) 3-1 2 3
  • Transfer RNA Leucine 8 (Anticodon CAA) 2 3
  • Transfer RNA-Leu (CAA) 3-1 2 3
  • TRNA-Leu-CAA-3-1 2 162
  • TRNA-Leu (CAA) 3-1 3
  • TRL-CAA3-1 2
  • RF00005 168
  • TRNAL8 3

External Ids for TRL-CAA3-1 Gene

Previous HGNC Symbols for TRL-CAA3-1 Gene

  • TRNAL8

Summaries for TRL-CAA3-1 Gene

GeneCards Summary for TRL-CAA3-1 Gene

TRL-CAA3-1 (TRNA-Leu (Anticodon CAA) 3-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRL-CAA3-1 Gene

Additional gene information for TRL-CAA3-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRL-CAA3-1 Gene

Genomics for TRL-CAA3-1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TRL-CAA3-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J027602 Enhancer 1 ENCODE 600.7 +0.0 48 0.2 TEAD4 PRDM10 ZNF629 IKZF1 KDM1A ZNF692 JUND PRDM1 DDX20 MTA2 TRL-CAA3-1 piR-50437-558 ZKSCAN8 ZKSCAN3 ZSCAN12 ZSCAN9 ZNF322 ZKSCAN4 ZSCAN23 ENSG00000261584
GH06J027600 Enhancer 1 ENCODE 600.7 +1.4 1373 2.1 CEBPG PRDM10 ZNF629 LEF1 IKZF1 KDM1A JUND PRDM1 DDX20 RELA TRL-CAA3-1 piR-50437-558 ZKSCAN3 ZKSCAN8 ZSCAN9 ZSCAN12 ZKSCAN4 ZNF322 ZNF391 ZNF603P
GH06J027604 Enhancer 1 ENCODE 0.7 -3.0 -2993 1.4 GATAD2A TEAD4 PRDM10 ZNF629 ZNF512 IKZF1 ZNF692 ETV6 JUND PRDM1 RF00017-5385 TRL-CAA2-1 ZKSCAN8 ZKSCAN3 ZSCAN12 ZKSCAN4 ZSCAN9 ZNF322 ZSCAN23 ENSG00000261584
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRL-CAA3-1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRL-CAA3-1 Gene

Genomic Locations for TRL-CAA3-1 Gene
chr6:27,602,568-27,602,675
(GRCh38/hg38)
Size:
108 bases
Orientation:
Minus strand
chr6:27,570,348-27,570,454
(GRCh37/hg19)
Size:
107 bases
Orientation:
Minus strand

Genomic View for TRL-CAA3-1 Gene

Genes around TRL-CAA3-1 on UCSC Golden Path with GeneCards custom track
TRL-CAA3-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
TRL-CAA3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRL-CAA3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRL-CAA3-1 Gene

Proteins for TRL-CAA3-1 Gene

Post-translational modifications for TRL-CAA3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRL-CAA3-1 Gene

Domains & Families for TRL-CAA3-1 Gene

Gene Families for TRL-CAA3-1 Gene

genes like me logo Genes that share domains with TRL-CAA3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRL-CAA3-1 Gene

Function for TRL-CAA3-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRL-CAA3-1 Gene

Localization for TRL-CAA3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRL-CAA3-1 Gene

Pathways & Interactions for TRL-CAA3-1 Gene

PathCards logo

SuperPathways for TRL-CAA3-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRL-CAA3-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRL-CAA3-1 Gene

Drugs & Compounds for TRL-CAA3-1 Gene

No Compound Related Data Available

Transcripts for TRL-CAA3-1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRL-CAA3-1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000753A37_9606 tRNA 84 3

HGNC: 34597,

GtRNAdb: tRNA-Leu-CAA-3-1:CM000668.1:27570348-27570454, tRNA-Leu-CAA-3-1:CM000668.2:27602569-27602675,

ENA: HG983884.1:1..107:tRNA,

URS000072E663_9606 tRNA 107 1

Rfam: RF00005,

URS0000224A3A_9606 tRNA 84 1

ENA: X04548.1:5..88:tRNA,

URS000047F3CB_9606 tRNA 84 1

ENA: X04700.1:1..86:tRNA,

URS000044259A_9606 tRNA 83 1

ENA: M55689.1:1..108:tRNA,

TRL-CAA3-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRL-CAA3-1 Gene

No ASD Table

Relevant External Links for TRL-CAA3-1 Gene

GeneLoc Exon Structure for
TRL-CAA3-1

No data available for mRNA/cDNA for TRL-CAA3-1 Gene

Expression for TRL-CAA3-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRL-CAA3-1 Gene

Orthologs for TRL-CAA3-1 Gene

No data available for Orthologs and Evolution for TRL-CAA3-1 Gene

Paralogs for TRL-CAA3-1 Gene

No data available for Paralogs for TRL-CAA3-1 Gene

Variants for TRL-CAA3-1 Gene

Additional Variant Information for TRL-CAA3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRL-CAA3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRL-CAA3-1 Gene

Disorders for TRL-CAA3-1 Gene

No disorders were found for TRL-CAA3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRL-CAA3-1 Gene

Publications for TRL-CAA3-1 Gene

No publications were found for TRL-CAA3-1 Gene.

No data available for Mastermind for TRL-CAA3-1 Gene

Products for TRL-CAA3-1 Gene

Sources for TRL-CAA3-1 Gene