TRK-TTT7-1 Gene (RNA Gene)

TRNA-Lys (Anticodon TTT) 7-1

GC06P028747
GIFtS:
6
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Aliases for TRK-TTT7-1 Gene

Subcategory (RNA class) for TRK-TTT7-1 Gene

tRNA

Number of RNA Genes sources:

3 / 17

Aliases for TRK-TTT7-1 Gene

  • TRNA-Lys (Anticodon TTT) 7-1 2 3
  • Transfer RNA Lysine 29 (Anticodon UUU) 2 3
  • Transfer RNA-Lys (TTT) 7-1 2 3
  • TRNA-Lys-TTT-7-1 2 162
  • TRNA-Lys (TTT) 7-1 3
  • TRK-TTT7-1 2
  • TRNAK29 3
  • RF00005 168

External Ids for TRK-TTT7-1 Gene

Previous HGNC Symbols for TRK-TTT7-1 Gene

  • TRNAK29

Summaries for TRK-TTT7-1 Gene

GeneCards Summary for TRK-TTT7-1 Gene

TRK-TTT7-1 (TRNA-Lys (Anticodon TTT) 7-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRK-TTT7-1 Gene

Additional gene information for TRK-TTT7-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRK-TTT7-1 Gene

Genomics for TRK-TTT7-1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for TRK-TTT7-1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRK-TTT7-1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRK-TTT7-1 Gene

Genomic Locations for TRK-TTT7-1 Gene
chr6:28,747,744-28,747,816
(GRCh38/hg38)
Size:
73 bases
Orientation:
Plus strand
chr6:28,715,521-28,715,593
(GRCh37/hg19)
Size:
73 bases
Orientation:
Plus strand

Genomic View for TRK-TTT7-1 Gene

Genes around TRK-TTT7-1 on UCSC Golden Path with GeneCards custom track
TRK-TTT7-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
TRK-TTT7-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRK-TTT7-1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

Proteins for TRK-TTT7-1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TRK-TTT7-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRK-TTT7-1 Gene

Domains & Families for TRK-TTT7-1 Gene

Gene Families for TRK-TTT7-1 Gene

HGNC:
genes like me logo Genes that share domains with TRK-TTT7-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRK-TTT7-1 Gene

Function for TRK-TTT7-1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for TRK-TTT7-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRK-TTT7-1 Gene

Localization for TRK-TTT7-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRK-TTT7-1 Gene

Pathways & Interactions for TRK-TTT7-1 Gene

PathCards logo

SuperPathways for TRK-TTT7-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRK-TTT7-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRK-TTT7-1 Gene

Drugs & Compounds for TRK-TTT7-1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TRK-TTT7-1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRK-TTT7-1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00006CC2CC_9606 tRNA 73 4

HGNC: 34900,

GtRNAdb: tRNA-Lys-TTT-7-1:CM000668.1:28715521-28715593, tRNA-Lys-TTT-7-1:CM000668.2:28747744-28747816,

Rfam: RF00005,

ENA: HG983939.1:1..73:tRNA,

URS00006DBB6C_9606 tRNA 73 1

Rfam: RF00005,

TRK-TTT7-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRK-TTT7-1 Gene

No ASD Table

Relevant External Links for TRK-TTT7-1 Gene

GeneLoc Exon Structure for
TRK-TTT7-1

No data available for mRNA/cDNA for TRK-TTT7-1 Gene

Expression for TRK-TTT7-1 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRK-TTT7-1 Gene

Orthologs for TRK-TTT7-1 Gene

No data available for Orthologs and Evolution for TRK-TTT7-1 Gene

Paralogs for TRK-TTT7-1 Gene

No data available for Paralogs for TRK-TTT7-1 Gene

Variants for TRK-TTT7-1 Gene

Additional Variant Information for TRK-TTT7-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRK-TTT7-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRK-TTT7-1 Gene

Disorders for TRK-TTT7-1 Gene

No disorders were found for TRK-TTT7-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRK-TTT7-1 Gene

Publications for TRK-TTT7-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3

No data available for Mastermind for TRK-TTT7-1 Gene

Products for TRK-TTT7-1 Gene

Sources for TRK-TTT7-1 Gene