Free for academic non-profit institutions. Other users need a Commercial license

TRK-TTT7-1 Gene(RNA Gene)

Transfer RNA-Lys (TTT) 7-1

GCID:
GC06P028747
GIFtS:
7
Genes Participants
UDN Logo

Aliases for TRK-TTT7-1 Gene

Subcategory (RNA class) for TRK-TTT7-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRK-TTT7-1 Gene

  • Transfer RNA-Lys (TTT) 7-1 2 3
  • Transfer RNA Lysine 29 (Anticodon UUU) 2 3
  • TRNA-Lys-TTT-7-1 3
  • TRNAK29 3

External Ids for TRK-TTT7-1 Gene

ORGUL Members for TRK-TTT7-1 Gene

Previous HGNC Symbols for TRK-TTT7-1 Gene

  • TRNAK29

Summaries for TRK-TTT7-1 Gene

GeneCards Summary for TRK-TTT7-1 Gene

TRK-TTT7-1 (Transfer RNA-Lys (TTT) 7-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRK-TTT7-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRK-TTT7-1 Gene

Genomics for TRK-TTT7-1 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for TRK-TTT7-1 Gene

Promoters and enhancers for TRK-TTT7-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06I028747 Enhancer 1.5 Ensembl ENCODE dbSUPER 550.8 -0.1 -58 1.1 ARNT SIN3A ZNF2 ZNF766 CBX5 ZNF213 E2F8 FOS SP3 REST GC06P028748 TRK-TTT7-1 ZSCAN12 TRIM27 ZKSCAN3 ZKSCAN8 ZNF311 ZNF602P ZSCAN23 ENSG00000261839
GH06I028750 Enhancer 0.8 dbSUPER 0.8 +3.5 3498 1.8 HDAC1 HDGF ARNT ZBTB40 NCOA2 TCF12 GATA2 ATF7 SMARCA5 ZBTB2 TRIM27 ZNF603P GPX5 ZKSCAN3 TRK-TTT7-1 GC06M028760 TRA-TGC6-1 GC06P028492
GH06I028755 Enhancer 1.5 Ensembl ENCODE dbSUPER 0.4 +9.9 9852 3.3 HDGF HNRNPUL1 PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 GC06M028760 TRA-TGC6-1 ZKSCAN8 ZSCAN12 TRIM27 ZKSCAN3 ZSCAN23 ZFP57 ZKSCAN4 ZNF603P
GH06I028752 Enhancer 1.1 ENCODE dbSUPER 0.4 +5.0 5020 0.9 HDGF PKNOX1 ATF1 ARNT GTF3C2 ZNF121 POLR2B ZNF213 E2F8 ARID2 TRIM27 ZKSCAN4 ZNF603P GC06M028760 TRA-TGC6-1 TRK-TTT7-1 GC06P028492
GH06I028754 Enhancer 0.9 dbSUPER 0.4 +6.9 6915 0.9 ATF1 POLR2B ZNF766 ATF7 ZNF592 MEF2D NR2C1 KDM1A BRD4 NFATC3 TRIM27 ZNF603P LINC01556 GC06M028760 TRA-TGC6-1 TRK-TTT7-1 GC06P028492
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRK-TTT7-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRK-TTT7-1 Gene

Genomic Locations for TRK-TTT7-1 Gene
chr6:28,747,744-28,747,816
(GRCh38/hg38)
Size:
73 bases
Orientation:
Plus strand
chr6:28,715,521-28,715,593
(GRCh37/hg19)

Genomic View for TRK-TTT7-1 Gene

Genes around TRK-TTT7-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRK-TTT7-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRK-TTT7-1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TRK-TTT7-1 Gene

Proteins for TRK-TTT7-1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TRK-TTT7-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRK-TTT7-1 Gene

Domains & Families for TRK-TTT7-1 Gene

Gene Families for TRK-TTT7-1 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRK-TTT7-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRK-TTT7-1 Gene

Function for TRK-TTT7-1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for TRK-TTT7-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRK-TTT7-1 Gene

Localization for TRK-TTT7-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRK-TTT7-1 Gene

Pathways & Interactions for TRK-TTT7-1 Gene

SuperPathways for TRK-TTT7-1 Gene

PathCards logo More details on SuperPathways for TRK-TTT7-1
No Data Available

Interacting Proteins for TRK-TTT7-1 Gene

Gene Ontology (GO) - Biological Process for TRK-TTT7-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRK-TTT7-1 Gene

Drugs & Compounds for TRK-TTT7-1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TRK-TTT7-1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRK-TTT7-1 Gene

No ASD Table

Relevant External Links for TRK-TTT7-1 Gene

GeneLoc Exon Structure for
TRK-TTT7-1
ECgene alternative splicing isoforms for
TRK-TTT7-1

No data available for mRNA/cDNA for TRK-TTT7-1 Gene

Expression for TRK-TTT7-1 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRK-TTT7-1 Gene

Orthologs for TRK-TTT7-1 Gene

No data available for Orthologs and Evolution for TRK-TTT7-1 Gene

Paralogs for TRK-TTT7-1 Gene

No data available for Paralogs for TRK-TTT7-1 Gene

Variants for TRK-TTT7-1 Gene

Additional Variant Information for TRK-TTT7-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRK-TTT7-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRK-TTT7-1 Gene

Disorders for TRK-TTT7-1 Gene

No disorders were found for TRK-TTT7-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRK-TTT7-1 Gene

Publications for TRK-TTT7-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRK-TTT7-1 Gene

Sources for TRK-TTT7-1 Gene

Content
Loading form....