TRK-TTT17-1 Gene (Pseudogene)

TRNA-Lys (TTT) 17-1

GC08P018262
GIFtS:
3
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Aliases for TRK-TTT17-1 Gene

Aliases for TRK-TTT17-1 Gene

  • TRNA-Lys (TTT) 17-1 2 3
  • Transfer RNA Lysine 41 (Anticodon UUU) Pseudogene 2 3
  • Transfer RNA-Lys (TTT) 17-1 2 3
  • TRNA-Lys-TTT-17-1 2
  • TRNAK41P 3

External Ids for TRK-TTT17-1 Gene

Previous HGNC Symbols for TRK-TTT17-1 Gene

  • TRNAK41P

Summaries for TRK-TTT17-1 Gene

GeneCards Summary for TRK-TTT17-1 Gene

TRK-TTT17-1 (TRNA-Lys (TTT) 17-1) is a Pseudogene.

Additional gene information for TRK-TTT17-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TRK-TTT17-1 Gene

Genomics for TRK-TTT17-1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for TRK-TTT17-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH08J018262 Enhancer 0.6 Ensembl ENCODE 250.7 +0.5 488 1.4 POLR2A EP300 NR2F2 HG983949 TRK-TTT17-1 ENSG00000253557 piR-49400-088 NAT1 NAT2 lnc-PSD3-4
GH08J018268 Enhancer 0.2 Ensembl 0.4 +6.4 6407 0.6 HG983949 TRK-TTT17-1 piR-49400-088 NAT1 NAT2 lnc-PSD3-4
GH08J018216 Enhancer 0.2 Ensembl 0.3 -46.6 -46593 0.2 lnc-NAT2-2 HG983949 NAT1 TRK-TTT17-1 NAT2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRK-TTT17-1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRK-TTT17-1 Gene

Latest Assembly
chr8:18,262,694-18,262,763
(GRCh38/hg38)
Size:
70 bases
Orientation:
Plus strand

Previous Assembly
chr8:18,120,203-18,120,272
(GRCh37/hg19 by Entrez Gene)
Size:
70 bases
Orientation:
Plus strand

Genomic View for TRK-TTT17-1 Gene

Genes around TRK-TTT17-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRK-TTT17-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRK-TTT17-1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TRK-TTT17-1 Gene

Proteins for TRK-TTT17-1 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for TRK-TTT17-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRK-TTT17-1 Gene

Domains & Families for TRK-TTT17-1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRK-TTT17-1 Gene

Function for TRK-TTT17-1 Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRK-TTT17-1 Gene

Localization for TRK-TTT17-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRK-TTT17-1 Gene

Pathways & Interactions for TRK-TTT17-1 Gene

PathCards logo

SuperPathways for TRK-TTT17-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRK-TTT17-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRK-TTT17-1 Gene

Drugs & Compounds for TRK-TTT17-1 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for TRK-TTT17-1 Gene

Products:

  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Alternative Splicing Database (ASD) splice patterns (SP) for TRK-TTT17-1 Gene

No ASD Table

Relevant External Links for TRK-TTT17-1 Gene

GeneLoc Exon Structure for
TRK-TTT17-1

No data available for mRNA/cDNA for TRK-TTT17-1 Gene

Expression for TRK-TTT17-1 Gene

Products:

  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRK-TTT17-1 Gene

Orthologs for TRK-TTT17-1 Gene

No data available for Orthologs and Evolution for TRK-TTT17-1 Gene

Paralogs for TRK-TTT17-1 Gene

No data available for Paralogs for TRK-TTT17-1 Gene

Variants for TRK-TTT17-1 Gene

Additional Variant Information for TRK-TTT17-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRK-TTT17-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRK-TTT17-1 Gene

Disorders for TRK-TTT17-1 Gene

No disorders were found for TRK-TTT17-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRK-TTT17-1 Gene

Publications for TRK-TTT17-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3

No data available for Mastermind for TRK-TTT17-1 Gene

Products for TRK-TTT17-1 Gene

Sources for TRK-TTT17-1 Gene