TRK-CTT2-4 Gene (RNA Gene)

TRNA-Lys (Anticodon CTT) 2-4

GC06P029294
GIFtS:
6
See more...

Aliases for TRK-CTT2-4 Gene

Subcategory (RNA class) for TRK-CTT2-4 Gene

tRNA

Number of RNA Genes sources:

3 / 17

Aliases for TRK-CTT2-4 Gene

  • TRNA-Lys (Anticodon CTT) 2-4 2 3
  • Transfer RNA Lysine 14 (Anticodon CUU) 2 3
  • Transfer RNA-Lys (CTT) 2-5 2 3
  • Transfer RNA-Lys (CTT) 2-4 2 3
  • TRNA-Lys-CTT-2-5 3 162
  • TRNA-Lys-CTT-2-4 2 162
  • TRK-CTT2-5 2 3
  • TRNA-Lys (CTT) 2-4 3
  • TRNA-Lys-CTT-2-3 162
  • TRNA-Lys-CTT-2-1 162
  • TRNA-Lys-CTT-2-2 162
  • TRK-CTT2-1 2
  • TRK-CTT2-4 2
  • TRK-CTT2-2 2
  • TRK-CTT2-3 2
  • TRNAK14 3
  • RF00005 168

External Ids for TRK-CTT2-4 Gene

Previous HGNC Symbols for TRK-CTT2-4 Gene

  • TRNAK14
  • TRK-CTT2-5

Previous GeneCards Identifiers for TRK-CTT2-4 Gene

  • GC05M181221
  • GC06P027531
  • GC06P027665
  • GC06P027975
  • GC06P028660
  • GC06P026714
  • GC06P026746
  • GC06P026790
  • GC06P026761
  • GC06P026947
  • GC06P027044
  • GC06P027194
  • GC06P027381

Summaries for TRK-CTT2-4 Gene

GeneCards Summary for TRK-CTT2-4 Gene

TRK-CTT2-4 (TRNA-Lys (Anticodon CTT) 2-4) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRK-CTT2-4 Gene

Additional gene information for TRK-CTT2-4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRK-CTT2-4 Gene

Genomics for TRK-CTT2-4 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for TRK-CTT2-4 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J026555 Enhancer 1.2 ENCODE dbSUPER 600.7 +0.0 34 1.3 GATAD2A TEAD4 PRDM10 ZNF629 TFE3 LEF1 SOX13 IKZF1 ZNF692 RCOR2 TRK-CTT2-4 TRP-AGG2-2 piR-31103 piR-39017-006 ZNF322 HMGN4 BTN2A1 RF00017-5380 ABT1
GH06J026557 Enhancer 0.4 Ensembl dbSUPER 600.7 +1.1 1055 0.4 ZFP64 RF00017-5380 TRK-CTT2-4 piR-31103 piR-39017-006 HMGN4 ABT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRK-CTT2-4 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRK-CTT2-4 Gene

Genomic Locations for TRK-CTT2-4 Gene
chr6:26,556,546-26,556,618
(GRCh38/hg38)
Size:
73 bases
Orientation:
Plus strand
chr6:26,556,774-26,556,846
(GRCh37/hg19)
Size:
73 bases
Orientation:
Plus strand

Genomic View for TRK-CTT2-4 Gene

Genes around TRK-CTT2-4 on UCSC Golden Path with GeneCards custom track
TRK-CTT2-4 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
TRK-CTT2-4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRK-CTT2-4 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TRK-CTT2-4 Gene

Proteins for TRK-CTT2-4 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TRK-CTT2-4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRK-CTT2-4 Gene

Domains & Families for TRK-CTT2-4 Gene

Gene Families for TRK-CTT2-4 Gene

HGNC:
genes like me logo Genes that share domains with TRK-CTT2-4: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRK-CTT2-4 Gene

Function for TRK-CTT2-4 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRK-CTT2-4 Gene

Localization for TRK-CTT2-4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRK-CTT2-4 Gene

Pathways & Interactions for TRK-CTT2-4 Gene

PathCards logo

SuperPathways for TRK-CTT2-4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRK-CTT2-4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRK-CTT2-4 Gene

Drugs & Compounds for TRK-CTT2-4 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TRK-CTT2-4 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRK-CTT2-4 Gene

TRK-CTT2-4 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRK-CTT2-4 Gene

No ASD Table

Relevant External Links for TRK-CTT2-4 Gene

GeneLoc Exon Structure for
TRK-CTT2-4

No data available for mRNA/cDNA for TRK-CTT2-4 Gene

Expression for TRK-CTT2-4 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRK-CTT2-4 Gene

Orthologs for TRK-CTT2-4 Gene

No data available for Orthologs and Evolution for TRK-CTT2-4 Gene

Paralogs for TRK-CTT2-4 Gene

No data available for Paralogs for TRK-CTT2-4 Gene

Variants for TRK-CTT2-4 Gene

Additional Variant Information for TRK-CTT2-4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRK-CTT2-4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRK-CTT2-4 Gene

Disorders for TRK-CTT2-4 Gene

No disorders were found for TRK-CTT2-4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRK-CTT2-4 Gene

Publications for TRK-CTT2-4 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3

ExternalLinks

View latest publications for TRK-CTT2-4 gene in Mastermind

Products for TRK-CTT2-4 Gene

Sources for TRK-CTT2-4 Gene