Aliases for TRIM75P Gene

Aliases for TRIM75P Gene

  • Tripartite Motif Containing 75, Pseudogene 2 3 5
  • TRIM75 3 4
  • Tripartite Motif-Containing Protein 75 Pseudogene 4
  • Putative Tripartite Motif-Containing Protein 75 4
  • Tripartite Motif-Containing Protein 75 3
  • Tripartite Motif-Containing 75 2
  • Tripartite Motif Containing 75 2
  • TRIM75P 5

External Ids for TRIM75P Gene

Previous HGNC Symbols for TRIM75P Gene

  • TRIM75

Previous GeneCards Identifiers for TRIM75P Gene

  • GC04P165982

Summaries for TRIM75P Gene

GeneCards Summary for TRIM75P Gene

TRIM75P (Tripartite Motif Containing 75, Pseudogene) is a Pseudogene. An important paralog of this gene is TRIM39.

Additional gene information for TRIM75P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TRIM75P Gene

Genomics for TRIM75P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TRIM75P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J165130 Enhancer 0.3 Ensembl 4.7 +76.5 76537 0.8 PKNOX1 SPI1 TMEM192 KLHL2 MIR578 TRIM75P piR-38920-014 piR-35674-402 TRIM60
GH04J165058 Enhancer 0.2 ENCODE 0.7 +4.9 4914 1.2 TRIM75P lnc-TMEM192-2 TRIM60 KLHL2
GH04J165048 Enhancer 0.2 Ensembl 0.4 -5.4 -5363 0.2 ENSG00000249617 lnc-TRIM60-1 TRIM75P TRIM60 KLHL2
GH04J165059 Enhancer 0.2 Ensembl 0.4 +5.6 5637 0.2 TRIM75P lnc-TMEM192-2 TRIM60 KLHL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRIM75P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRIM75P Gene

Genomic Locations for TRIM75P Gene
chr4:165,053,864-165,060,562
(GRCh38/hg38)
Size:
6,699 bases
Orientation:
Plus strand
chr4:165,980,120-165,981,714
(GRCh37/hg19)
Size:
1,595 bases
Orientation:
Plus strand

Genomic View for TRIM75P Gene

Genes around TRIM75P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRIM75P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRIM75P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRIM75P Gene

Proteins for TRIM75P Gene

  • Protein details for TRIM75P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NK02-TRI75_HUMAN
    Recommended name:
    Putative tripartite motif-containing protein 75
    Protein Accession:
    A6NK02

    Protein attributes for TRIM75P Gene

    Size:
    468 amino acids
    Molecular mass:
    53678 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRIM75P Gene

Post-translational modifications for TRIM75P Gene

No Post-translational modifications

Other Protein References for TRIM75P Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRIM75P Gene

Domains & Families for TRIM75P Gene

Gene Families for TRIM75P Gene

Suggested Antigen Peptide Sequences for TRIM75P Gene

GenScript: Design optimal peptide antigens:
  • Tripartite motif-containing protein 75 (TRI75_HUMAN)

Graphical View of Domain Structure for InterPro Entry

A6NK02

UniProtKB/Swiss-Prot:

TRI75_HUMAN :
  • Belongs to the TRIM/RBCC family.
Family:
  • Belongs to the TRIM/RBCC family.
genes like me logo Genes that share domains with TRIM75P: view

Function for TRIM75P Gene

Gene Ontology (GO) - Molecular Function for TRIM75P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IEA --
GO:0008270 zinc ion binding IEA --
GO:0046872 metal ion binding IEA --
GO:0061630 ubiquitin protein ligase activity IBA 21873635
genes like me logo Genes that share ontologies with TRIM75P: view
genes like me logo Genes that share phenotypes with TRIM75P: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for TRIM75P

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRIM75P Gene

Localization for TRIM75P Gene

Gene Ontology (GO) - Cellular Components for TRIM75P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005615 extracellular space HDA 22664934
GO:0005737 cytoplasm IBA 21873635
genes like me logo Genes that share ontologies with TRIM75P: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for TRIM75P Gene

Pathways & Interactions for TRIM75P Gene

PathCards logo

SuperPathways for TRIM75P Gene

No Data Available

Interacting Proteins for TRIM75P Gene

Selected Interacting proteins: A6NK02-TRI75_HUMAN for TRIM75P Gene via IID

Gene Ontology (GO) - Biological Process for TRIM75P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0010468 regulation of gene expression IBA 21873635
GO:0016567 protein ubiquitination IBA 21873635
GO:0045087 innate immune response IBA 21873635
genes like me logo Genes that share ontologies with TRIM75P: view

No data available for Pathways by source and SIGNOR curated interactions for TRIM75P Gene

Drugs & Compounds for TRIM75P Gene

No Compound Related Data Available

Transcripts for TRIM75P Gene

mRNA/cDNA for TRIM75P Gene

1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for TRIM75P

Alternative Splicing Database (ASD) splice patterns (SP) for TRIM75P Gene

No ASD Table

Relevant External Links for TRIM75P Gene

GeneLoc Exon Structure for
TRIM75P

Expression for TRIM75P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRIM75P Gene

mRNA differential expression in normal tissues according to GTEx for TRIM75P Gene

This gene is overexpressed in Testis (x4.8).

Protein differential expression in normal tissues from HIPED for TRIM75P Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for TRIM75P Gene



Protein tissue co-expression partners for TRIM75P Gene

genes like me logo Genes that share expression patterns with TRIM75P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRIM75P Gene

Orthologs for TRIM75P Gene

Evolution for TRIM75P Gene

ENSEMBL:
Gene Tree for TRIM75P (if available)
TreeFam:
Gene Tree for TRIM75P (if available)

No data available for Orthologs for TRIM75P Gene

Paralogs for TRIM75P Gene

genes like me logo Genes that share paralogs with TRIM75P: view

Variants for TRIM75P Gene

Additional Variant Information for TRIM75P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRIM75P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRIM75P Gene

Disorders for TRIM75P Gene

Additional Disease Information for TRIM75P

No disorders were found for TRIM75P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRIM75P Gene

Publications for TRIM75P Gene

  1. Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells. (PMID: 27634302) Oliviero G … Cagney G (Molecular & cellular proteomics : MCP 2016) 3
  2. Comparison of tear protein levels in breast cancer patients and healthy controls using a de novo proteomic approach. (PMID: 22664934) Böhm D … Grus FH (Oncology reports 2012) 3
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
  4. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier LW … Wilson RK (Nature 2005) 4

Products for TRIM75P Gene

Sources for TRIM75P Gene