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TRIM65 (Tripartite Motif Containing 65) is a Protein Coding gene. An important paralog of this gene is TRIM47.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0008270 | zinc ion binding | IEA | -- |
GO:0046872 | metal ion binding | IEA | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005634 | nucleus | IDA | -- |
GO:0005654 | nucleoplasm | IDA | -- |
GO:0005829 | cytosol | IDA | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0010508 | positive regulation of autophagy | IBA,IMP | 26347139 |
ExUns: | 1a | · | 1b | · | 1c | ^ | 2a | · | 2b | ^ | 3a | · | 3b | ^ | 4 | ^ | 5 | ^ | 6a | · | 6b | · | 6c |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SP1: | - | ||||||||||||||||||||||
SP2: | - | - | |||||||||||||||||||||
SP3: | |||||||||||||||||||||||
SP4: |
This gene was present in the common ancestor of chordates.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
chimpanzee (Pan troglodytes) |
Mammalia | TRIM65 33 32 |
|
OneToOne | |
cow (Bos Taurus) |
Mammalia | TRIM65 33 32 |
|
OneToOne | |
dog (Canis familiaris) |
Mammalia | TRIM65 33 32 |
|
OneToOne | |
mouse (Mus musculus) |
Mammalia | Trim65 17 33 32 |
|
||
rat (Rattus norvegicus) |
Mammalia | Trim65 32 |
|
||
oppossum (Monodelphis domestica) |
Mammalia | TRIM65 33 |
|
OneToOne | |
platypus (Ornithorhynchus anatinus) |
Mammalia | TRIM65 33 |
|
OneToOne | |
chicken (Gallus gallus) |
Aves | TRIM65 32 |
|
||
-- 33 |
|
ManyToMany | |||
lizard (Anolis carolinensis) |
Reptilia | TRIM65 33 |
|
OneToOne | |
tropical clawed frog (Silurana tropicalis) |
Amphibia | trim65 32 |
|
||
zebrafish (Danio rerio) |
Actinopterygii | LOC100149099 32 |
|
||
trim65 33 |
|
OneToOne |
SNP ID | Clin | Chr 17 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs1000162227 | -- | 75,898,241(-) | C/T | upstream_transcript_variant | |
rs1000178036 | -- | 75,894,148(-) | C/A | intron_variant | |
rs1000236073 | -- | 75,898,003(-) | T/C | upstream_transcript_variant | |
rs1000545846 | -- | 75,880,014(-) | AAA/AAAAAA | downstream_transcript_variant | |
rs1000574119 | -- | 75,896,818(-) | C/T | coding_sequence_variant, non_coding_transcript_variant, stop_gained |
No disorders were found for TRIM65 Gene.