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Aliases for TRIM53AP Gene

Aliases for TRIM53AP Gene

  • Tripartite Motif Containing 53A, Pseudogene 2 3 5
  • Tripartite Motif Containing 53, Pseudogene 2 3
  • Tripartite Motif-Containing 53 2 3
  • Tripartite Motif-Containing 49 Pseudogene 3
  • Tripartite Motif Containing 53 2
  • TRIM80P 3
  • TRIM53P 3
  • TRIM53 3

External Ids for TRIM53AP Gene

Previous HGNC Symbols for TRIM53AP Gene

  • TRIM53
  • TRIM53P

Previous GeneCards Identifiers for TRIM53AP Gene

  • GC11M089727

Summaries for TRIM53AP Gene

GeneCards Summary for TRIM53AP Gene

TRIM53AP (Tripartite Motif Containing 53A, Pseudogene) is a Pseudogene.

Additional gene information for TRIM53AP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRIM53AP Gene

Genomics for TRIM53AP Gene

Genomic Locations for TRIM53AP Gene

Genomic Locations for TRIM53AP Gene
8,973 bases
Minus strand

Genomic View for TRIM53AP Gene

Genes around TRIM53AP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRIM53AP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRIM53AP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRIM53AP Gene

No data available for GeneHancer (GH) Regulatory Elements for TRIM53AP Gene

Proteins for TRIM53AP Gene

Post-translational modifications for TRIM53AP Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRIM53AP Gene

Domains & Families for TRIM53AP Gene

Gene Families for TRIM53AP Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRIM53AP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRIM53AP Gene

Function for TRIM53AP Gene

Phenotypes for TRIM53AP Gene

GenomeRNAi human phenotypes for TRIM53AP:
genes like me logo Genes that share phenotypes with TRIM53AP: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRIM53AP Gene

Localization for TRIM53AP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRIM53AP Gene

Pathways & Interactions for TRIM53AP Gene

SuperPathways for TRIM53AP Gene

No Data Available

Interacting Proteins for TRIM53AP Gene

Gene Ontology (GO) - Biological Process for TRIM53AP Gene


No data available for Pathways by source and SIGNOR curated interactions for TRIM53AP Gene

Drugs & Compounds for TRIM53AP Gene

No Compound Related Data Available

Transcripts for TRIM53AP Gene

mRNA/cDNA for TRIM53AP Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TRIM53AP Gene

Tripartite motif containing 53A, pseudogene:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRIM53AP Gene

No ASD Table

Relevant External Links for TRIM53AP Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TRIM53AP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRIM53AP Gene

NURSA nuclear receptor signaling pathways regulating expression of TRIM53AP Gene:


SOURCE GeneReport for Unigene cluster for TRIM53AP Gene:

genes like me logo Genes that share expression patterns with TRIM53AP: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRIM53AP Gene

Orthologs for TRIM53AP Gene

Evolution for TRIM53AP Gene

Gene Tree for TRIM53AP (if available)
Gene Tree for TRIM53AP (if available)

No data available for Orthologs for TRIM53AP Gene

Paralogs for TRIM53AP Gene

No data available for Paralogs for TRIM53AP Gene

Variants for TRIM53AP Gene

Sequence variations from dbSNP and Humsavar for TRIM53AP Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000577489 -- 90,003,234(-) T/C upstream_transcript_variant
rs1001329683 -- 89,998,315(-) T/C intron_variant
rs1001401868 -- 89,997,812(-) A/G intron_variant
rs1001512183 -- 90,001,169(-) C/T intron_variant
rs1004756554 -- 90,000,398(-) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for TRIM53AP Gene

Variant ID Type Subtype PubMed ID
dgv233n67 CNV gain 20364138
esv2759849 CNV gain+loss 17122850
esv2762931 CNV gain 21179565
esv33414 CNV loss 17666407
esv3579830 CNV loss 25503493
esv3579831 CNV loss 25503493
esv3579993 CNV gain 25503493
esv3892056 CNV gain+loss 25118596
esv3892060 CNV gain 25118596
nsv1036092 CNV loss 25217958
nsv1043643 CNV gain 25217958
nsv1133000 OTHER inversion 24896259
nsv469862 CNV gain 16826518
nsv508647 CNV deletion 20534489
nsv7222 OTHER inversion 18451855
nsv819015 CNV loss 19587683
nsv826025 CNV gain 20364138
nsv832225 CNV gain 17160897
nsv8858 CNV gain+loss 18304495
nsv972059 CNV duplication 23825009
nsv972060 CNV duplication 23825009

Additional Variant Information for TRIM53AP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TRIM53AP Gene

Disorders for TRIM53AP Gene

Additional Disease Information for TRIM53AP

No disorders were found for TRIM53AP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRIM53AP Gene

Publications for TRIM53AP Gene

  1. Identification of a genomic reservoir for new TRIM genes in primate genomes. (PMID: 22144910) Han K … Sawyer SL (PLoS genetics 2011) 3 58

Products for TRIM53AP Gene

Sources for TRIM53AP Gene

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