TRIM51GP Gene (Pseudogene)

Tripartite Motif-Containing 51G, Pseudogene

GC11M061153
GIFtS:
8
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Aliases for TRIM51GP Gene

Aliases for TRIM51GP Gene

  • Tripartite Motif-Containing 51G, Pseudogene 2 3 5 13
  • TRIM51GP 5

External Ids for TRIM51GP Gene

Previous GeneCards Identifiers for TRIM51GP Gene

  • GC11M048998
  • GC11M049128
  • GC11M049922
  • GC11M049586
  • GC11M049611
  • GC11M055840
  • GC11M056075
  • GC11M056215
  • GC11M059730
  • GC11M050820
  • GC11M051615
  • GC11M052277
  • GC11M052937
  • GC11M053606
  • GC11M054271
  • GC11M054937
  • GC11M055643

Summaries for TRIM51GP Gene

GeneCards Summary for TRIM51GP Gene

TRIM51GP (Tripartite Motif-Containing 51G, Pseudogene) is a Pseudogene. An important paralog of this gene is TRIM51.

Additional gene information for TRIM51GP Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TRIM51GP Gene

Genomics for TRIM51GP Gene

Genomic Locations for TRIM51GP Gene

Genomic Locations for TRIM51GP Gene
chr11:48,975,320-48,983,826
(GRCh38/hg38)
Size:
8,507 bases
Orientation:
Minus strand
chr11:48,997,050-49,003,247
(GRCh37/hg19)
Size:
6,198 bases
Orientation:
Minus strand

Genomic View for TRIM51GP Gene

Genes around TRIM51GP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRIM51GP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRIM51GP Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TRIM51GP Gene

No data available for GeneHancer (GH) Regulatory Elements for TRIM51GP Gene

Proteins for TRIM51GP Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for TRIM51GP Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A3B3IT33-A0A3B3IT33_HUMAN
    Recommended name:
    Tripartite motif-containing 51G, pseudogene
    Protein Accession:
    A0A3B3IT33

    Protein attributes for TRIM51GP Gene

    Size:
    452 amino acids
    Molecular mass:
    53047 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRIM51GP Gene

Post-translational modifications for TRIM51GP Gene

No Post-translational modifications

Other Protein References for TRIM51GP Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRIM51GP Gene

Domains & Families for TRIM51GP Gene

Gene Families for TRIM51GP Gene

HGNC:

Protein Domains for TRIM51GP Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with TRIM51GP: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRIM51GP Gene

Function for TRIM51GP Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for TRIM51GP Gene

Gene Ontology (GO) - Molecular Function for TRIM51GP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IEA --
GO:0008270 zinc ion binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with TRIM51GP: view
genes like me logo Genes that share phenotypes with TRIM51GP: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRIM51GP Gene

Localization for TRIM51GP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRIM51GP Gene

Pathways & Interactions for TRIM51GP Gene

PathCards logo

SuperPathways for TRIM51GP Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRIM51GP Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRIM51GP Gene

Drugs & Compounds for TRIM51GP Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TRIM51GP Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for TRIM51GP Gene

1 REFSEQ mRNAs :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRIM51GP Gene

No ASD Table

Relevant External Links for TRIM51GP Gene

GeneLoc Exon Structure for
TRIM51GP

Expression for TRIM51GP Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRIM51GP Gene

mRNA expression in normal human tissues for TRIM51GP Gene
mRNA expression by GTEx for TRIM51GP Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TRIM51GP

genes like me logo Genes that share expression patterns with TRIM51GP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRIM51GP Gene

Orthologs for TRIM51GP Gene

Evolution for TRIM51GP Gene

ENSEMBL:
Gene Tree for TRIM51GP (if available)
TreeFam:
Gene Tree for TRIM51GP (if available)

No data available for Orthologs for TRIM51GP Gene

Paralogs for TRIM51GP Gene

Paralogs for TRIM51GP Gene

genes like me logo Genes that share paralogs with TRIM51GP: view

Variants for TRIM51GP Gene

Additional Variant Information for TRIM51GP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRIM51GP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRIM51GP Gene

Disorders for TRIM51GP Gene

Additional Disease Information for TRIM51GP

Open Targets Platform

No disorders were found for TRIM51GP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRIM51GP Gene

Publications for TRIM51GP Gene

  1. Identification of a genomic reservoir for new TRIM genes in primate genomes. (PMID: 22144910) Han K … Sawyer SL (PLoS genetics 2011) 3
  2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose JE … Uhl GR (Molecular medicine (Cambridge, Mass.) 2010) 3
  3. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 13

ExternalLinks

View latest publications for TRIM51GP gene in Mastermind

Products for TRIM51GP Gene

Sources for TRIM51GP Gene