Aliases for TRIM51FP Gene

Aliases for TRIM51FP Gene

  • Tripartite Motif-Containing 51F, Pseudogene 2 3 5
  • Putative Tripartite Motif-Containing Protein 49B 3
  • SPRY Domain Containing 5 Pseudogene 3
  • TRIM51FP 5
  • TRIM49B 3
  • RNF18B 3

External Ids for TRIM51FP Gene

Previous GeneCards Identifiers for TRIM51FP Gene

  • GC11M049856
  • GC11M049993
  • GC11M049946
  • GC11M050599
  • GC11M055852
  • GC11M056096
  • GC11M056238
  • GC11M059748
  • GC11M050834
  • GC11M051626
  • GC11M052288
  • GC11M052948
  • GC11M053617
  • GC11M054282
  • GC11M054949
  • GC11M055655

Summaries for TRIM51FP Gene

GeneCards Summary for TRIM51FP Gene

TRIM51FP (Tripartite Motif-Containing 51F, Pseudogene) is a Pseudogene.

Additional gene information for TRIM51FP Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TRIM51FP Gene

Genomics for TRIM51FP Gene

Genomic Locations for TRIM51FP Gene

Genomic Locations for TRIM51FP Gene
chr11:49,832,966-49,839,330
(GRCh38/hg38)
Size:
6,365 bases
Orientation:
Minus strand
chr11:49,854,689-49,860,872
(GRCh37/hg19)
Size:
6,184 bases
Orientation:
Minus strand

Genomic View for TRIM51FP Gene

Genes around TRIM51FP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRIM51FP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRIM51FP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRIM51FP Gene

No data available for GeneHancer (GH) Regulatory Elements for TRIM51FP Gene

Proteins for TRIM51FP Gene

Post-translational modifications for TRIM51FP Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRIM51FP Gene

Domains & Families for TRIM51FP Gene

Gene Families for TRIM51FP Gene

genes like me logo Genes that share domains with TRIM51FP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRIM51FP Gene

Function for TRIM51FP Gene

Phenotypes From GWAS Catalog for TRIM51FP Gene

Gene Ontology (GO) - Molecular Function for TRIM51FP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008270 zinc ion binding IEA --
GO:0061630 ubiquitin protein ligase activity IBA 21873635
genes like me logo Genes that share ontologies with TRIM51FP: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRIM51FP Gene

Localization for TRIM51FP Gene

Gene Ontology (GO) - Cellular Components for TRIM51FP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IBA 21873635
genes like me logo Genes that share ontologies with TRIM51FP: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for TRIM51FP Gene

Pathways & Interactions for TRIM51FP Gene

PathCards logo

SuperPathways for TRIM51FP Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRIM51FP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0010468 regulation of gene expression IBA 21873635
GO:0016567 protein ubiquitination IBA 21873635
GO:0045087 innate immune response IBA 21873635
genes like me logo Genes that share ontologies with TRIM51FP: view

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRIM51FP Gene

Drugs & Compounds for TRIM51FP Gene

No Compound Related Data Available

Transcripts for TRIM51FP Gene

mRNA/cDNA for TRIM51FP Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRIM51FP Gene

No ASD Table

Relevant External Links for TRIM51FP Gene

GeneLoc Exon Structure for
TRIM51FP

Expression for TRIM51FP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRIM51FP Gene

mRNA differential expression in normal tissues according to GTEx for TRIM51FP Gene

This gene is overexpressed in Brain - Caudate (basal ganglia) (x9.0), Brain - Nucleus accumbens (basal ganglia) (x7.3), Brain - Frontal Cortex (BA9) (x7.2), Brain - Anterior cingulate cortex (BA24) (x6.1), Brain - Cortex (x4.7), and Brain - Putamen (basal ganglia) (x4.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for TRIM51FP Gene



Protein tissue co-expression partners for TRIM51FP Gene

- Elite partner
genes like me logo Genes that share expression patterns with TRIM51FP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRIM51FP Gene

Orthologs for TRIM51FP Gene

Evolution for TRIM51FP Gene

ENSEMBL:
Gene Tree for TRIM51FP (if available)
TreeFam:
Gene Tree for TRIM51FP (if available)

No data available for Orthologs for TRIM51FP Gene

Paralogs for TRIM51FP Gene

No data available for Paralogs for TRIM51FP Gene

Variants for TRIM51FP Gene

Additional Variant Information for TRIM51FP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRIM51FP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRIM51FP Gene

Disorders for TRIM51FP Gene

No disorders were found for TRIM51FP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRIM51FP Gene

Publications for TRIM51FP Gene

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
  2. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 3

Products for TRIM51FP Gene

Sources for TRIM51FP Gene