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Aliases for TRIM51FP Gene
Aliases for TRIM51FP Gene
External Ids for TRIM51FP Gene
- HGNC: 43966
- Entrez Gene: 283257
- Ensembl: ENSG00000219061
Previous GeneCards Identifiers for TRIM51FP Gene
- GC11M049856
- GC11M049993
- GC11M049946
- GC11M050599
- GC11M055852
- GC11M056096
- GC11M056238
- GC11M059748
- GC11M050834
- GC11M051626
- GC11M052288
- GC11M052948
- GC11M053617
- GC11M054282
- GC11M054949
- GC11M055655
Summaries for TRIM51FP Gene
GeneCards Summary for TRIM51FP Gene
TRIM51FP (Tripartite Motif-Containing 51F, Pseudogene) is a Pseudogene.
Additional gene information for TRIM51FP Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TRIM51FP Gene
Genomics for TRIM51FP Gene
Genomic Locations for TRIM51FP Gene
Genomic Locations for TRIM51FP Gene
- chr11:49,832,966-49,839,330
- (GRCh38/hg38)
- Size:
- 6,365 bases
- Orientation:
- Minus strand
- chr11:49,854,689-49,860,872
- (GRCh37/hg19)
- Size:
- 6,184 bases
- Orientation:
- Minus strand
Genomic View for TRIM51FP Gene
Genes around TRIM51FP on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11p11.12 by HGNC
- 11p11.12 by Entrez Gene
- 11p11.12 by Ensembl
TRIM51FP Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for TRIM51FP Gene
No data available for GeneHancer (GH) Regulatory Elements for TRIM51FP Gene
Proteins for TRIM51FP Gene
Protein Expression for TRIM51FP Gene
Post-translational modifications for TRIM51FP Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for TRIM51FP
- Origene Custom Protein Services for TRIM51FP
No data available for DME Specific Peptides for TRIM51FP Gene
Domains & Families for TRIM51FP Gene
Gene Families for TRIM51FP Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRIM51FP Gene
Function for TRIM51FP Gene
Phenotypes From GWAS Catalog for TRIM51FP Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0008270 | zinc ion binding | IEA | -- |
| GO:0061630 | ubiquitin protein ligase activity | IBA | 21873635 |
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for TRIM51FP
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRIM51FP Gene
Localization for TRIM51FP Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005737 | cytoplasm | IBA | 21873635 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for TRIM51FP Gene
Pathways & Interactions for TRIM51FP Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0010468 | regulation of gene expression | IBA | 21873635 |
| GO:0016567 | protein ubiquitination | IBA | 21873635 |
| GO:0045087 | innate immune response | IBA | 21873635 |
No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRIM51FP Gene
Transcripts for TRIM51FP Gene
mRNA/cDNA for TRIM51FP Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000526452 1353 nts (view in UCSC)
CRISPR Products
- Browse CRISPR knockouts for TRIM51FP
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for TRIM51FP Gene
- GeneLoc Exon Structure for
- TRIM51FP
Expression for TRIM51FP Gene
mRNA differential expression in normal tissues according to GTEx for TRIM51FP Gene
This gene is overexpressed in Brain - Caudate (basal ganglia) (x9.0), Brain - Nucleus accumbens (basal ganglia) (x7.3), Brain - Frontal Cortex (BA9) (x7.2), Brain - Anterior cingulate cortex (BA24) (x6.1), Brain - Cortex (x4.7), and Brain - Putamen (basal ganglia) (x4.6).
- Elite partner
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRIM51FP Gene
Orthologs for TRIM51FP Gene
No data available for Orthologs for TRIM51FP Gene
Paralogs for TRIM51FP Gene
No data available for Paralogs for TRIM51FP Gene
Variants for TRIM51FP Gene
Additional Variant Information for TRIM51FP Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- TRIM51FP
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRIM51FP Gene
Disorders for TRIM51FP Gene
No disorders were found for TRIM51FP Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRIM51FP Gene
Publications for TRIM51FP Gene
- Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
- Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 3
ExternalLinks
Products for TRIM51FP Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for TRIM51FP
- Origene Custom Protein Services for TRIM51FP
- Browse OriGene Inhibitory RNA Products For TRIM51FP
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for TRIM51FP
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For TRIM51FP
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for TRIM51FP
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for TRIM51FP
- Search GeneCopoeia for miRNA 3'UTR Target clone products for TRIM51FP
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for TRIM51FP
Sources for TRIM51FP Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB