Aliases for TRIM26BP Gene

Aliases for TRIM26BP Gene

  • Tripartite Motif Containing 26B, Pseudogene 2 3 5
  • Tripartite Motif Containing 26 Pseudogene 1 2 3
  • Tripartite Motif-Containing 26 Pseudogene 2 3
  • TRIM26P1 2 3
  • Em:AB023053.1 2
  • TRIM26BP 5
  • TRIM26P 3

External Ids for TRIM26BP Gene

Previous HGNC Symbols for TRIM26BP Gene

  • TRIM26P

Previous GeneCards Identifiers for TRIM26BP Gene

  • GC06P030211
  • GC06P030336
  • GC06P030333
  • GC06P030444
  • GC06P032271
  • GC06P032444
  • GC06P032573
  • GC06P033231
  • GC06P030459
  • GC06P030526
  • GC06P030740
  • GC06P030888
  • GC06P031045
  • GC06P031196
  • GC06P031401
  • GC06P032041

Summaries for TRIM26BP Gene

GeneCards Summary for TRIM26BP Gene

TRIM26BP (Tripartite Motif Containing 26B, Pseudogene) is a Pseudogene.

Additional gene information for TRIM26BP Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TRIM26BP Gene

Genomics for TRIM26BP Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TRIM26BP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J030231 Enhancer 0.7 Ensembl 0.4 -7.0 -6981 0.6 ZNF629 ZNF561 ZBTB44 TCF7L2 TSHZ1 OSR2 BCL11A WT1 ZNF184 PRDM4 HLA-K MICD TRIM39 TRIM31 TRIM31-AS1 MDC1 TRIM26 HCG18 HLA-W TRIM26BP
GH06J030227 Enhancer 0.7 Ensembl ENCODE 0.4 -10.3 -10339 0.9 POLR2A RELA ARID3A RELB RUNX3 ARNT NR2F1 TBP TBX21 MTA2 piR-55648-071 TRIM26 TRIM26BP MN298114-199 TRIM39 RF00017-5399
GH06J030233 Enhancer 0.4 Ensembl 0.7 -3.7 -3700 1.2 SCRT2 MYNN HNF4A HLF TRIM40 TRIM31 TRIM31-AS1 TRIM26 HLA-W ZFP57 TRIM26BP piR-55648-071 MN298114-199 HCG17
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRIM26BP on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRIM26BP Gene

Genomic Locations for TRIM26BP Gene
chr6:30,238,301-30,242,279
(GRCh38/hg38)
Size:
3,979 bases
Orientation:
Plus strand
chr6:30,206,078-30,210,056
(GRCh37/hg19)
Size:
3,979 bases
Orientation:
Plus strand

Genomic View for TRIM26BP Gene

Genes around TRIM26BP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRIM26BP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRIM26BP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRIM26BP Gene

Proteins for TRIM26BP Gene

Post-translational modifications for TRIM26BP Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRIM26BP Gene

Domains & Families for TRIM26BP Gene

Gene Families for TRIM26BP Gene

genes like me logo Genes that share domains with TRIM26BP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRIM26BP Gene

Function for TRIM26BP Gene

Phenotypes From GWAS Catalog for TRIM26BP Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRIM26BP Gene

Localization for TRIM26BP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRIM26BP Gene

Pathways & Interactions for TRIM26BP Gene

PathCards logo

SuperPathways for TRIM26BP Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRIM26BP Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRIM26BP Gene

Drugs & Compounds for TRIM26BP Gene

No Compound Related Data Available

Transcripts for TRIM26BP Gene

mRNA/cDNA for TRIM26BP Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRIM26BP Gene

No ASD Table

Relevant External Links for TRIM26BP Gene

GeneLoc Exon Structure for
TRIM26BP

Expression for TRIM26BP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRIM26BP Gene

genes like me logo Genes that share expression patterns with TRIM26BP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRIM26BP Gene

Orthologs for TRIM26BP Gene

Evolution for TRIM26BP Gene

ENSEMBL:
Gene Tree for TRIM26BP (if available)
TreeFam:
Gene Tree for TRIM26BP (if available)

No data available for Orthologs for TRIM26BP Gene

Paralogs for TRIM26BP Gene

No data available for Paralogs for TRIM26BP Gene

Variants for TRIM26BP Gene

Additional Variant Information for TRIM26BP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRIM26BP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRIM26BP Gene

Disorders for TRIM26BP Gene

No disorders were found for TRIM26BP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRIM26BP Gene

Publications for TRIM26BP Gene

  1. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T … Inoko H (Proceedings of the National Academy of Sciences of the United States of America 1999) 3

Products for TRIM26BP Gene

Sources for TRIM26BP Gene