Aliases for TRIAP1 Gene

Aliases for TRIAP1 Gene

  • TP53 Regulated Inhibitor Of Apoptosis 1 2 3 5
  • P53CSV 2 2 3 4
  • P53-Inducible Cell-Survival Factor 2 3 4
  • WF-1 2 3 4
  • TP53-Regulated Inhibitor Of Apoptosis 1 3 4
  • Protein 15E1.1 3 4
  • HSPC132 2 3
  • MDM35 2 3
  • Mitochondrial Distribution And Morphology 35 Homolog (S. Cerevisiae) 2
  • Mitochondrial Distribution And Morphology 35 Homolog 3
  • TRIAP1 5
  • 15E1.1 4

External Ids for TRIAP1 Gene

Previous GeneCards Identifiers for TRIAP1 Gene

  • GC12M119366
  • GC12M120881
  • GC12M117891

Summaries for TRIAP1 Gene

GeneCards Summary for TRIAP1 Gene

TRIAP1 (TP53 Regulated Inhibitor Of Apoptosis 1) is a Protein Coding gene. Diseases associated with TRIAP1 include Cone-Rod Dystrophy 1 and Spastic Ataxia 5. Among its related pathways are TP53 Regulates Transcription of Cell Death Genes and Gene Expression. Gene Ontology (GO) annotations related to this gene include p53 binding and phosphatidic acid transporter activity.

UniProtKB/Swiss-Prot Summary for TRIAP1 Gene

  • Involved in the modulation of the mitochondrial apoptotic pathway by ensuring the accumulation of cardiolipin (CL) in mitochondrial membranes. In vitro, the TRIAP1:PRELID1 complex mediates the transfer of phosphatidic acid (PA) between liposomes and probably functions as a PA transporter across the mitochondrion intermembrane space to provide PA for CL synthesis in the inner membrane (PubMed:23931759). Likewise, the TRIAP1:PRELID3A complex mediates the transfer of phosphatidic acid (PA) between liposomes (in vitro) and probably functions as a PA transporter across the mitochondrion intermembrane space (in vivo) (PubMed:26071602). Mediates cell survival by inhibiting activation of caspase-9 which prevents induction of apoptosis (PubMed:15735003).

No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TRIAP1 Gene

Genomics for TRIAP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TRIAP1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRIAP1 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for TRIAP1

Top Transcription factor binding sites by QIAGEN in the TRIAP1 gene promoter:
  • c-Myc
  • C/EBPalpha
  • GR
  • GR-alpha
  • GR-beta
  • Max
  • MIF-1
  • MyoD
  • Olf-1
  • RFX1

Genomic Locations for TRIAP1 Gene

Latest Assembly
chr12:120,443,964-120,446,384
(GRCh38/hg38)
Size:
2,421 bases
Orientation:
Minus strand

Previous Assembly
chr12:120,881,767-120,884,187
(GRCh37/hg19 by Entrez Gene)
Size:
2,421 bases
Orientation:
Minus strand

chr12:120,881,764-120,884,215
(GRCh37/hg19 by Ensembl)
Size:
2,452 bases
Orientation:
Minus strand

Genomic View for TRIAP1 Gene

Genes around TRIAP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRIAP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRIAP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRIAP1 Gene

Proteins for TRIAP1 Gene

  • Protein details for TRIAP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O43715-TRIA1_HUMAN
    Recommended name:
    TP53-regulated inhibitor of apoptosis 1
    Protein Accession:
    O43715
    Secondary Accessions:
    • B2R4Z7
    • Q5RKS5
    • Q6LCA7

    Protein attributes for TRIAP1 Gene

    Size:
    76 amino acids
    Molecular mass:
    8786 Da
    Quaternary structure:
    • Monomer (PubMed:26071602). Interacts with APAF1 and HSP70 (PubMed:15735003). Forms a complex with PRELID1 in the mitochondrion intermembrane space (PubMed:23931759). Interacts with PRELID3A (PubMed:26071602).
    SequenceCaution:
    • Sequence=AAR00584.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for TRIAP1 Gene

neXtProt entry for TRIAP1 Gene

Post-translational modifications for TRIAP1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TRIAP1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TRIAP1 Gene

Domains & Families for TRIAP1 Gene

Gene Families for TRIAP1 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins
  • Transporters

Protein Domains for TRIAP1 Gene

InterPro:
Blocks:
  • Protein of unknown function UPF0203
ProtoNet:

Suggested Antigen Peptide Sequences for TRIAP1 Gene

GenScript: Design optimal peptide antigens:
  • p53-inducible cell-survival factor (TRIA1_HUMAN)

Graphical View of Domain Structure for InterPro Entry

O43715

UniProtKB/Swiss-Prot:

TRIA1_HUMAN :
  • Belongs to the TRIAP1/MDM35 family.
Family:
  • Belongs to the TRIAP1/MDM35 family.
genes like me logo Genes that share domains with TRIAP1: view

Function for TRIAP1 Gene

Molecular function for TRIAP1 Gene

UniProtKB/Swiss-Prot Function:
Involved in the modulation of the mitochondrial apoptotic pathway by ensuring the accumulation of cardiolipin (CL) in mitochondrial membranes. In vitro, the TRIAP1:PRELID1 complex mediates the transfer of phosphatidic acid (PA) between liposomes and probably functions as a PA transporter across the mitochondrion intermembrane space to provide PA for CL synthesis in the inner membrane (PubMed:23931759). Likewise, the TRIAP1:PRELID3A complex mediates the transfer of phosphatidic acid (PA) between liposomes (in vitro) and probably functions as a PA transporter across the mitochondrion intermembrane space (in vivo) (PubMed:26071602). Mediates cell survival by inhibiting activation of caspase-9 which prevents induction of apoptosis (PubMed:15735003).
UniProtKB/Swiss-Prot CatalyticActivity:
Reaction=a 1,2-diacyl-sn-glycero-3-phosphate(in) = a 1,2-diacyl-sn-glycero-3-phosphate(out); Xref=Rhea:RHEA:36435, ChEBI:CHEBI:58608; Evidence={ECO:0000269|PubMed:23931759};.
UniProtKB/Swiss-Prot Induction:
In p53/TP53-dependent manner in response to low levels of DNA damage. Not induced when DNA damage is severe.

Phenotypes From GWAS Catalog for TRIAP1 Gene

Gene Ontology (GO) - Molecular Function for TRIAP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002039 p53 binding IPI 15735003
GO:0005515 protein binding IPI 15735003
GO:1990050 contributes_to phosphatidic acid transporter activity IDA 23931759
genes like me logo Genes that share ontologies with TRIAP1: view
genes like me logo Genes that share phenotypes with TRIAP1: view

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for TRIAP1

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for TRIAP1 Gene

Localization for TRIAP1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TRIAP1 Gene

Mitochondrion. Mitochondrion intermembrane space.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for TRIAP1 gene
Compartment Confidence
mitochondrion 5
nucleus 5
extracellular 3
cytosol 3
endoplasmic reticulum 2
plasma membrane 1
cytoskeleton 1
peroxisome 1
endosome 1
lysosome 1
golgi apparatus 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Mitochondria (2)
  • Nucleoplasm (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for TRIAP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005654 nucleoplasm IDA --
GO:0005739 mitochondrion IEA,IDA 15735003
GO:0005758 mitochondrial intermembrane space TAS --
GO:0032991 protein-containing complex IDA 23931759
genes like me logo Genes that share ontologies with TRIAP1: view

Pathways & Interactions for TRIAP1 Gene

genes like me logo Genes that share pathways with TRIAP1: view

Gene Ontology (GO) - Biological Process for TRIAP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006869 lipid transport IEA --
GO:0006915 apoptotic process IEA --
GO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest TAS 15735003
GO:0015914 phospholipid transport IDA 26071602
GO:0030330 DNA damage response, signal transduction by p53 class mediator IDA 15735003
genes like me logo Genes that share ontologies with TRIAP1: view

No data available for SIGNOR curated interactions for TRIAP1 Gene

Drugs & Compounds for TRIAP1 Gene

No Compound Related Data Available

Transcripts for TRIAP1 Gene

mRNA/cDNA for TRIAP1 Gene

1 REFSEQ mRNAs :
6 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for TRIAP1

Alternative Splicing Database (ASD) splice patterns (SP) for TRIAP1 Gene

No ASD Table

Relevant External Links for TRIAP1 Gene

GeneLoc Exon Structure for
TRIAP1

Expression for TRIAP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRIAP1 Gene

Protein differential expression in normal tissues from HIPED for TRIAP1 Gene

This gene is overexpressed in Peripheral blood mononuclear cells (28.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for TRIAP1 Gene



Protein tissue co-expression partners for TRIAP1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TRIAP1

SOURCE GeneReport for Unigene cluster for TRIAP1 Gene:

Hs.69499

Evidence on tissue expression from TISSUES for TRIAP1 Gene

  • Blood(4.4)
  • Liver(4.4)
  • Nervous system(4.4)
  • Heart(4.3)
  • Kidney(2.2)
  • Bone marrow(2.2)
  • Spleen(2.2)
  • Skin(2.1)
  • Lymph node(2)
genes like me logo Genes that share expression patterns with TRIAP1: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRIAP1 Gene

Orthologs for TRIAP1 Gene

This gene was present in the common ancestor of animals.

Orthologs for TRIAP1 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia TRIAP1 30 31
  • 100 (n)
OneToOne
Cow
(Bos Taurus)
Mammalia TRIAP1 30 31
  • 94.3 (n)
OneToOne
Oppossum
(Monodelphis domestica)
Mammalia -- 31
  • 93 (a)
OneToMany
-- 31
  • 84 (a)
OneToMany
Mouse
(Mus musculus)
Mammalia Triap1 30 17 31
  • 92.11 (n)
OneToOne
Dog
(Canis familiaris)
Mammalia TRIAP1 30 31
  • 92.11 (n)
OneToOne
Rat
(Rattus norvegicus)
Mammalia Triap1 30
  • 90.79 (n)
Chicken
(Gallus gallus)
Aves TRIAP1 30 31
  • 83.33 (n)
OneToOne
Lizard
(Anolis carolinensis)
Reptilia TRIAP1 31
  • 81 (a)
OneToOne
Tropical Clawed Frog
(Silurana tropicalis)
Amphibia triap1 30
  • 75.68 (n)
African clawed frog
(Xenopus laevis)
Amphibia Xl.20201 30
Zebrafish
(Danio rerio)
Actinopterygii triap1 30 31
  • 75.23 (n)
OneToOne
Dr.17876 30
Rainbow Trout
(Oncorhynchus mykiss)
Actinopterygii Omy.7129 30
Fruit Fly
(Drosophila melanogaster)
Insecta CG30108 31
  • 39 (a)
OneToMany
CG30109 31
  • 36 (a)
OneToMany
Species where no ortholog for TRIAP1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for TRIAP1 Gene

ENSEMBL:
Gene Tree for TRIAP1 (if available)
TreeFam:
Gene Tree for TRIAP1 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for TRIAP1: view image

Paralogs for TRIAP1 Gene

Pseudogenes.org Pseudogenes for TRIAP1 Gene

genes like me logo Genes that share paralogs with TRIAP1: view

No data available for Paralogs for TRIAP1 Gene

Variants for TRIAP1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for TRIAP1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for TRIAP1 Gene

Variant ID Type Subtype PubMed ID
esv3630923 CNV gain 21293372
nsv509482 CNV insertion 20534489
nsv819389 CNV loss 19587683

Variation tolerance for TRIAP1 Gene

Residual Variation Intolerance Score: 62.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.26; 5.71% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for TRIAP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRIAP1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for TRIAP1 Gene

Disorders for TRIAP1 Gene

MalaCards: The human disease database

(4) MalaCards diseases for TRIAP1 Gene - From: COP

Disorder Aliases PubMed IDs
cone-rod dystrophy 1
  • cord1
spastic ataxia 5
autoimmune glomerulonephritis
immune-complex glomerulonephritis
  • immune complex glomerulonephritis
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for TRIAP1

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
Atlas
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
Open Targets Platform
Open Targets Platform
genes like me logo Genes that share disorders with TRIAP1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for TRIAP1 Gene

Publications for TRIAP1 Gene

  1. p53CSV, a novel p53-inducible gene involved in the p53-dependent cell-survival pathway. (PMID: 15735003) Park WR … Nakamura Y (Cancer research 2005) 2 3 4 23
  2. Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. (PMID: 11042152) Zhang QH … Chen Z (Genome research 2000) 2 3 4
  3. Structural insight into the TRIAP1/PRELI-like domain family of mitochondrial phospholipid transfer complexes. (PMID: 26071602) Miliara X … Matthews S (EMBO reports 2015) 3 4
  4. TRIAP1/PRELI complexes prevent apoptosis by mediating intramitochondrial transport of phosphatidic acid. (PMID: 23931759) Potting C … Langer T (Cell metabolism 2013) 3 4
  5. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PMID: 20877624) Hendrickson SL … O'Brien SJ (PloS one 2010) 3 41

Products for TRIAP1 Gene

Sources for TRIAP1 Gene