Aliases for TRI-AAT5-3 Gene

Subcategory (RNA class) for TRI-AAT5-3 Gene

tRNA

Quality Score for this RNA gene is

13

Aliases for TRI-AAT5-3 Gene

  • TRNA-Ile (Anticodon AAT) 5-3 2 3
  • Transfer RNA Isoleucine 17 (Anticodon AAU) 2 3
  • Transfer RNA-Ile (AAT) 5-3 2 3
  • Transfer RNA-Ile (AAT) 5-5 2 3
  • TRNA-Ile-AAT-5-5 3 167
  • TRI-AAT5-5 2 3
  • TRNA-Ile (AAT) 5-3 3
  • TRNA-Ile-AAT-5-3 167
  • TRNA-Ile-AAT-5-4 167
  • TRNA-Ile-AAT-5-2 167
  • TRNA-Ile-AAT-5-1 167
  • TRI-AAT5-2 2
  • TRI-AAT5-4 2
  • TRI-AAT5-1 2
  • TRI-AAT5-3 2
  • TRNAI17 3
  • RF00005 174

External Ids for TRI-AAT5-3 Gene

Previous HGNC Symbols for TRI-AAT5-3 Gene

  • TRNAI17
  • TRI-AAT5-5

Previous GeneCards Identifiers for TRI-AAT5-3 Gene

  • GC06P026587
  • GC06P026644
  • GC06M027255
  • GC06M027256
  • GC06M027238
  • GC06M027239
  • GC06M027241
  • GC06M027245
  • GC06M027247
  • GC06M027250
  • GC06M027252

Summaries for TRI-AAT5-3 Gene

GeneCards Summary for TRI-AAT5-3 Gene

TRI-AAT5-3 (TRNA-Ile (Anticodon AAT) 5-3) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRI-AAT5-3 Gene

Additional gene information for TRI-AAT5-3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRI-AAT5-3 Gene

Genomics for TRI-AAT5-3 Gene

GeneHancer (GH) Regulatory Elements for TRI-AAT5-3 Gene

Promoters and enhancers for TRI-AAT5-3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J027235 Enhancer 1 ENCODE 750.6 +1.9 1878 1.5 GTF3C2 ZNF785 ZNF24 ZBTB40 SMARCE1 CTBP1 MIXL1 ZNF362 CC2D1A L3MBTL2 TRI-AAT5-3 TRV-AAC5-1 piR-33415-005 piR-36037-009 ZKSCAN8 ABT1 ZNF322 BTN3A2 ZSCAN9 ZNF204P
GH06J027236 Enhancer 0.9 ENCODE 750.6 +0.7 681 0.8 SMARCE1 TCF7L2 USF2 CC2D1A ELF1 L3MBTL2 ZC3H8 ZKSCAN8 CSDE1 CEBPG TRI-AAT5-3 TRV-AAC5-1 piR-33415-005 piR-36037-009 ZKSCAN8 ZNF322 BTN2A3P ZSCAN9 HMGN4 ABT1
GH06J027237 Enhancer 0.9 ENCODE 750.6 +0.1 147 0.2 GTF3C2 ZNF24 ZBTB40 ZNF362 CC2D1A ELF1 L3MBTL2 TEAD4 ZC3H8 ZKSCAN8 TRI-AAT5-3 TRV-AAC5-1 piR-33415-005 piR-36037-009 ZKSCAN8 ZNF322 BTN2A3P ABT1 HMGN4 ZNF391
GH06J027238 Enhancer 0.7 ENCODE 750.6 -0.2 -207 0.1 ZBTB40 ELF1 ZKSCAN8 BACH1 DPF2 ZNF629 HDAC1 ZNF24 FOXK2 HDAC2 TRI-AAT5-3 piR-33415-005 piR-36037-009 RNU6-471P piR-33614-236
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRI-AAT5-3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRI-AAT5-3 Gene

Genomic Locations for TRI-AAT5-3 Gene
chr6:27,237,571-27,237,644
(GRCh38/hg38)
Size:
74 bases
Orientation:
Minus strand
chr6:27,205,350-27,205,423
(GRCh37/hg19)
Size:
74 bases
Orientation:
Minus strand

Genomic View for TRI-AAT5-3 Gene

Genes around TRI-AAT5-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRI-AAT5-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRI-AAT5-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRI-AAT5-3 Gene

Proteins for TRI-AAT5-3 Gene

Post-translational modifications for TRI-AAT5-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRI-AAT5-3 Gene

Domains & Families for TRI-AAT5-3 Gene

Gene Families for TRI-AAT5-3 Gene

genes like me logo Genes that share domains with TRI-AAT5-3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRI-AAT5-3 Gene

Function for TRI-AAT5-3 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRI-AAT5-3 Gene

Localization for TRI-AAT5-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRI-AAT5-3 Gene

Pathways & Interactions for TRI-AAT5-3 Gene

PathCards logo

SuperPathways for TRI-AAT5-3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRI-AAT5-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRI-AAT5-3 Gene

Drugs & Compounds for TRI-AAT5-3 Gene

No Compound Related Data Available

Transcripts for TRI-AAT5-3 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRI-AAT5-3 Gene

No ASD Table

Relevant External Links for TRI-AAT5-3 Gene

GeneLoc Exon Structure for
TRI-AAT5-3
ECgene alternative splicing isoforms for
TRI-AAT5-3

Expression for TRI-AAT5-3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRI-AAT5-3 Gene

Orthologs for TRI-AAT5-3 Gene

No data available for Orthologs and Evolution for TRI-AAT5-3 Gene

Paralogs for TRI-AAT5-3 Gene

No data available for Paralogs for TRI-AAT5-3 Gene

Variants for TRI-AAT5-3 Gene

Additional Variant Information for TRI-AAT5-3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRI-AAT5-3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRI-AAT5-3 Gene

Disorders for TRI-AAT5-3 Gene

No disorders were found for TRI-AAT5-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRI-AAT5-3 Gene

Publications for TRI-AAT5-3 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 56

No data available for External Links for TRI-AAT5-3 Gene

Products for TRI-AAT5-3 Gene

Sources for TRI-AAT5-3 Gene