Aliases for TRH-GTG1-6 Gene

Data sources for TRH-GTG1-6 Gene:

RNA type for TRH-GTG1-6 Gene

tRNA

Aliases for TRH-GTG1-6 Gene

External Ids for TRH-GTG1-6 Gene

Previous HGNC Symbols for TRH-GTG1-6 Gene

  • TRNAH5
  • TRH-GTG1-9

Previous GeneCards Identifiers for TRH-GTG1-6 Gene

  • GC15M045200

Summaries for TRH-GTG1-6 Gene

GeneCards Summary for TRH-GTG1-6 Gene

TRH-GTG1-6 (TRNA-His (Anticodon GTG) 1-6) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRH-GTG1-6 Gene

Additional gene information for TRH-GTG1-6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRH-GTG1-6 Gene

Genomics for TRH-GTG1-6 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TRH-GTG1-6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J014432 Enhancer 0.8 ENCODE 250.7 +0.3 342 2.3 ZNF654 IKZF1 NCOR1 NFIC TBP ARNT RAD21 TAL1 SMC3 NFE2 TRH-GTG1-6 HSALNG0070088 ENSG00000287708 NFIB
GH09J014428 Enhancer 0.7 Ensembl ENCODE 0.4 +5.1 5110 1 ZNF654 CTCF RAD21 SMC3 ZNF362 ZNF384 ZNF366 ZNF143 TRIM22 HSALNG0070088 NFIB TRH-GTG1-6 ENSG00000287708
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRH-GTG1-6 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRH-GTG1-6 Gene

Latest Assembly
chr9:14,433,940-14,434,011
(GRCh38/hg38)
Size:
72 bases
Orientation:
Minus strand

Previous Assembly
chr9:14,433,938-14,434,009
(GRCh37/hg19 by Entrez Gene)
Size:
72 bases
Orientation:
Minus strand

Genomic View for TRH-GTG1-6 Gene

Genes around TRH-GTG1-6 on UCSC Golden Path with GeneCards custom track
TRH-GTG1-6 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
TRH-GTG1-6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRH-GTG1-6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRH-GTG1-6 Gene

Proteins for TRH-GTG1-6 Gene

Post-translational modifications for TRH-GTG1-6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRH-GTG1-6 Gene

Domains & Families for TRH-GTG1-6 Gene

Gene Families for TRH-GTG1-6 Gene

genes like me logo Genes that share domains with TRH-GTG1-6: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRH-GTG1-6 Gene

Function for TRH-GTG1-6 Gene

Phenotypes From GWAS Catalog for TRH-GTG1-6 Gene

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRH-GTG1-6 Gene

Localization for TRH-GTG1-6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRH-GTG1-6 Gene

Pathways & Interactions for TRH-GTG1-6 Gene

PathCards logo

SuperPathways for TRH-GTG1-6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRH-GTG1-6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRH-GTG1-6 Gene

Drugs & Compounds for TRH-GTG1-6 Gene

No Compound Related Data Available

Transcripts for TRH-GTG1-6 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRH-GTG1-6 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000044BAE3_9606 ncRNA 72 3

GtRNAdb: tRNA-His-GTG-1-6:CM000671.2:14433940-14434011,

Rfam: RF00005,

ENA: View 9 records in RNAcentral

URS000067A424_9606 ncRNA 72 1

ENA: HG983841.1:1..72:tRNA,

TRH-GTG1-6 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for TRH-GTG1-6 Gene

No ASD Table

Relevant External Links for TRH-GTG1-6 Gene

GeneLoc Exon Structure for
TRH-GTG1-6

No data available for mRNA/cDNA for TRH-GTG1-6 Gene

Expression for TRH-GTG1-6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRH-GTG1-6 Gene

genes like me logo Genes that share expression patterns with TRH-GTG1-6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRH-GTG1-6 Gene

Orthologs for TRH-GTG1-6 Gene

No data available for Orthologs and Evolution for TRH-GTG1-6 Gene

Paralogs for TRH-GTG1-6 Gene

No data available for Paralogs for TRH-GTG1-6 Gene

Variants for TRH-GTG1-6 Gene

Additional Variant Information for TRH-GTG1-6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRH-GTG1-6
Leiden Open Variation Database (LOVD)
TRH-GTG1-6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRH-GTG1-6 Gene

Disorders for TRH-GTG1-6 Gene

No disorders were found for TRH-GTG1-6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRH-GTG1-6 Gene

Publications for TRH-GTG1-6 Gene

  1. A mammalian tRNAHis-containing antigen is recognized by the polymyositis-specific antibody anti-Jo-1. (PMID: 6188108) Rosa MD … Reichlin M (Nucleic acids research 1983) 2 3
  2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3

No data available for Mastermind for TRH-GTG1-6 Gene

Products for TRH-GTG1-6 Gene

Sources for TRH-GTG1-6 Gene