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Aliases for TRGV7 Gene

Aliases for TRGV7 Gene

  • T Cell Receptor Gamma Variable 7 (Pseudogene) 2 3
  • T-Cell Receptor, Gamma, Variable Region V7 (Pseudogene) 2 3
  • TCRGV7 2 3
  • T-Cell Receptor Gamma Variable 7 (Pseudogene) 5
  • V1S7P 3

External Ids for TRGV7 Gene

Previous HGNC Symbols for TRGV7 Gene

  • TCRGV7

Previous GeneCards Identifiers for TRGV7 Gene

  • GC07U990112
  • GC07M038081
  • GC07M038115
  • GC07M038148
  • GC07M038341
  • GC07M038375
  • GC07M038379
  • GC07M038381
  • GC07M038383
  • GC07M038425
  • GC07M038674
  • GC07M038902
  • GC07M039131
  • GC07M039262
  • GC07M038450
  • GC07M038458
  • GC07M038472
  • GC07M038484
  • GC07M038496
  • GC07M038510
  • GC07M038522

Summaries for TRGV7 Gene

GeneCards Summary for TRGV7 Gene

TRGV7 (T Cell Receptor Gamma Variable 7 (Pseudogene)) is a Pseudogene.

Additional gene information for TRGV7 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRGV7 Gene

Genomics for TRGV7 Gene

GeneHancer (GH) Regulatory Elements for TRGV7 Gene

Promoters and enhancers for TRGV7 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I038334 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -0.8 -827 3.7 HDGF PKNOX1 ARNT SIN3A ZNF2 POLR2B E2F8 ZNF143 ZNF263 SP3 TRGV7 ENSG00000272908 TRGV5 TRGV5P STARD3NL AMPH TRGV6 TRG
GH07I038357 Enhancer 1.1 Ensembl ENCODE dbSUPER 4.8 -24.2 -24187 3.8 CTCF RB1 BACH1 NFXL1 CC2D1A CTBP1 ZBTB48 EGR1 ZNF143 ZNF444 TRGV3 GC07P038357 GC07P038360 TRGV4 TRGV5P TRGV5 AMPH TRGV7 TRG TRG-AS1
GH07I038329 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.8 +4.4 4438 2.6 HDAC1 ZNF335 ZNF143 ATF7 CAVIN1 ELF1 HDAC8 ZNF592 MEF2D NFIC ENSG00000272908 TRGV8 STARD3NL TRGV5P TARP GC07P038328 TRGV7 TRG
GH07I038332 Enhancer 0.7 dbSUPER 0.8 +2.4 2367 1.3 ZNF740 CAVIN1 NR4A1 BACH1 GTF2A2 HDAC8 ZNF354B ZNF395 RELA ZNF592 ENSG00000272908 TRGV7 TRGV8 TRG
GH07I038339 Enhancer 0.4 Ensembl 0.8 -4.1 -4087 0.4 PKNOX1 ZNF512 TRG-AS1 TRGV6 TRGV7 TRG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRGV7 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRGV7 Gene

Genomic Locations for TRGV7 Gene
chr7:38,335,041-38,335,514
(GRCh38/hg38)
Size:
474 bases
Orientation:
Minus strand
chr7:38,374,642-38,375,115
(GRCh37/hg19)

Genomic View for TRGV7 Gene

Genes around TRGV7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRGV7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRGV7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRGV7 Gene

Proteins for TRGV7 Gene

Post-translational modifications for TRGV7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRGV7 Gene

Domains & Families for TRGV7 Gene

Gene Families for TRGV7 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRGV7: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRGV7 Gene

Function for TRGV7 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRGV7 Gene

Localization for TRGV7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRGV7 Gene

Pathways & Interactions for TRGV7 Gene

SuperPathways for TRGV7 Gene

No Data Available

Interacting Proteins for TRGV7 Gene

Gene Ontology (GO) - Biological Process for TRGV7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRGV7 Gene

Drugs & Compounds for TRGV7 Gene

No Compound Related Data Available

Transcripts for TRGV7 Gene

mRNA/cDNA for TRGV7 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRGV7 Gene

No ASD Table

Relevant External Links for TRGV7 Gene

GeneLoc Exon Structure for
TRGV7
ECgene alternative splicing isoforms for
TRGV7

Expression for TRGV7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRGV7 Gene

mRNA differential expression in normal tissues according to GTEx for TRGV7 Gene

This gene is overexpressed in Whole Blood (x18.0) and Spleen (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of TRGV7 Gene:

TRGV7
genes like me logo Genes that share expression patterns with TRGV7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRGV7 Gene

Orthologs for TRGV7 Gene

Evolution for TRGV7 Gene

ENSEMBL:
Gene Tree for TRGV7 (if available)
TreeFam:
Gene Tree for TRGV7 (if available)

No data available for Orthologs for TRGV7 Gene

Paralogs for TRGV7 Gene

No data available for Paralogs for TRGV7 Gene

Variants for TRGV7 Gene

Additional Variant Information for TRGV7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRGV7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRGV7 Gene

Disorders for TRGV7 Gene

Additional Disease Information for TRGV7

No disorders were found for TRGV7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRGV7 Gene

Publications for TRGV7 Gene

  1. Variable region genes in the human T-cell rearranging gamma (TRG) locus: V-J junction and homology with the mouse genes. (PMID: 2969332) Huck S … Lefranc MP (The EMBO journal 1988) 2 3 58
  2. Diversity and rearrangement of the human T cell rearranging gamma genes: nine germ-line variable genes belonging to two subgroups. (PMID: 2938743) LeFranc MP … Rabbitts TH (Cell 1986) 2 3 58
  3. Shifted Transversal Design smart-pooling for high coverage interactome mapping. (PMID: 19447967) Xin X … Thierry-Mieg N (Genome research 2009) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  5. The human T-cell receptor gamma (TRG) genes. (PMID: 2527426) Lefranc MP … Rabbitts TH (Trends in biochemical sciences 1989) 3 58

Products for TRGV7 Gene

Sources for TRGV7 Gene

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