This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). See more...

Aliases for TRG-CCC6-1 Gene

Subcategory (RNA class) for TRG-CCC6-1 Gene

tRNA

Number of RNA Genes sources:

3 / 17

Aliases for TRG-CCC6-1 Gene

  • TRNA-Gly (CCC) 6-1 2 3
  • Transfer RNA Glycine 34 (Anticodon CCC) Pseudogene 2 3
  • Transfer RNA-Gly (CCC) 6-1 2 3
  • TRNA-Gly-CCC-6-1 2 162
  • Transfer RNA Glycine (Anticodon CCC) 3
  • TRG-CCC6-1 2
  • TRNAG-CCC 3
  • TRNAG34P 3
  • RF00005 168

External Ids for TRG-CCC6-1 Gene

Previous HGNC Symbols for TRG-CCC6-1 Gene

  • TRNAG34P

Previous GeneCards Identifiers for TRG-CCC6-1 Gene

  • GC01M149709
  • GC01M149710

Summaries for TRG-CCC6-1 Gene

Entrez Gene Summary for TRG-CCC6-1 Gene

  • This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).

GeneCards Summary for TRG-CCC6-1 Gene

TRG-CCC6-1 (TRNA-Gly (CCC) 6-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRG-CCC6-1 Gene

Additional gene information for TRG-CCC6-1 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRG-CCC6-1 Gene

Genomics for TRG-CCC6-1 Gene

Genomic Locations for TRG-CCC6-1 Gene

Genomic Locations for TRG-CCC6-1 Gene
chr1:121,016,845-121,016,915
(GRCh38/hg38)
Size:
71 bases
Orientation:
Minus strand
chr1:17,004,766-17,004,836
(GRCh37/hg19)
Size:
71 bases
Orientation:
Minus strand

Genomic View for TRG-CCC6-1 Gene

Genes around TRG-CCC6-1 on UCSC Golden Path with GeneCards custom track
TRG-CCC6-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
TRG-CCC6-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRG-CCC6-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRG-CCC6-1 Gene

No data available for GeneHancer (GH) Regulatory Elements for TRG-CCC6-1 Gene

Proteins for TRG-CCC6-1 Gene

Post-translational modifications for TRG-CCC6-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRG-CCC6-1 Gene

Domains & Families for TRG-CCC6-1 Gene

Gene Families for TRG-CCC6-1 Gene

genes like me logo Genes that share domains with TRG-CCC6-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRG-CCC6-1 Gene

Function for TRG-CCC6-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRG-CCC6-1 Gene

Localization for TRG-CCC6-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRG-CCC6-1 Gene

Pathways & Interactions for TRG-CCC6-1 Gene

PathCards logo

SuperPathways for TRG-CCC6-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRG-CCC6-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRG-CCC6-1 Gene

Drugs & Compounds for TRG-CCC6-1 Gene

No Compound Related Data Available

Transcripts for TRG-CCC6-1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRG-CCC6-1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000644222_9606 tRNA 71 3

HGNC: 35073,

GtRNAdb: tRNA-Gly-CCC-6-1:CM000663.2:121016845-121016915,

Rfam: RF00005,

URS0000728B3E_9606 tRNA 71 1

ENA: HG983803.1:1..71:tRNA,

TRG-CCC6-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRG-CCC6-1 Gene

No ASD Table

Relevant External Links for TRG-CCC6-1 Gene

GeneLoc Exon Structure for
TRG-CCC6-1

No data available for mRNA/cDNA for TRG-CCC6-1 Gene

Expression for TRG-CCC6-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRG-CCC6-1 Gene

Orthologs for TRG-CCC6-1 Gene

No data available for Orthologs and Evolution for TRG-CCC6-1 Gene

Paralogs for TRG-CCC6-1 Gene

No data available for Paralogs for TRG-CCC6-1 Gene

Variants for TRG-CCC6-1 Gene

Additional Variant Information for TRG-CCC6-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRG-CCC6-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRG-CCC6-1 Gene

Disorders for TRG-CCC6-1 Gene

No disorders were found for TRG-CCC6-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRG-CCC6-1 Gene

Publications for TRG-CCC6-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3

No data available for Mastermind for TRG-CCC6-1 Gene

Products for TRG-CCC6-1 Gene

Sources for TRG-CCC6-1 Gene