Aliases for TRG-CCC1-1 Gene

Subcategory (RNA class) for TRG-CCC1-1 Gene

tRNA

Number of RNA Genes sources:

3 / 17

Aliases for TRG-CCC1-1 Gene

  • TRNA-Gly (Anticodon CCC) 1-1 2 3
  • Transfer RNA Glycine 37 (Anticodon CCC) 2 3
  • Transfer RNA-Gly (CCC) 1-1 2 3
  • TRNA-Gly-CCC-1-1 2 162
  • Transfer RNA Glycine 1 (Anticodon CCC) 3
  • TRNA Glycine1 (Anticodon CCC) 3
  • TRNA Glycine (CCC) 1 3
  • TRNA Glycine-GCC-1 3
  • TRNA-Gly (CCC) 1-1 3
  • TRNA-Gly-CCC-1-2 162
  • TRG-CCC1-1 2
  • TRG-CCC1-2 2
  • TRNAG37 3
  • RF00005 168
  • TRNAG1 3
  • TRG1 3

External Ids for TRG-CCC1-1 Gene

Previous HGNC Symbols for TRG-CCC1-1 Gene

  • TRNAG37

Previous GeneCards Identifiers for TRG-CCC1-1 Gene

  • GC01U904810

Summaries for TRG-CCC1-1 Gene

GeneCards Summary for TRG-CCC1-1 Gene

TRG-CCC1-1 (TRNA-Gly (Anticodon CCC) 1-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRG-CCC1-1 Gene

Additional gene information for TRG-CCC1-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRG-CCC1-1 Gene

Genomics for TRG-CCC1-1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TRG-CCC1-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J016545 Enhancer 1 ENCODE 600.7 +0.3 268 0.7 CREB1 GATAD2A ZBTB33 TEAD4 PRDM10 ZNF629 ZNF692 ZNF174 TARDBP ZNF300 HG984126-001 MF281432-001 TRV-CAC11-1 TRG-CCC1-1 piR-31924-001 CROCC SPEN CROCCP3 LINC01772 ENSG00000179743
GH01J016546 Enhancer 1 ENCODE 600.7 -0.2 -232 0.2 ZBTB33 ZNF629 ZNF174 TARDBP ZNF300 DDX20 MTA2 ZSCAN4 RXRB REST HG984126-001 MF281432-001 TRV-CAC11-1 TRG-CCC1-1 piR-31924-001 CROCCP3 CROCC LINC01772 SPEN ENSG00000179743
GH01J016544 Enhancer 0.7 ENCODE 600.7 +1.4 1408 0.2 SP1 JUND IKZF2 CTCF TRIM22 ARID3A ZSCAN29 DPF2 ARNT ELF1 MF281432-001 TRG-CCC1-1 piR-31924-001 MN296790 NBPF1 NECAP2
GH01J016540 Enhancer 0.8 ENCODE 0.4 +5.3 5319 0.9 LEF1 PKNOX1 REST DPF2 HDAC1 SOX6 ZBTB44 HMBOX1 MTA3 FOXK2 ARHGEF19 LINC01772 MST1P2 MN296790 MF281432-001 TRG-CCC1-1 NBPF1 NECAP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRG-CCC1-1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRG-CCC1-1 Gene

Genomic Locations for TRG-CCC1-1 Gene
chr1:16,545,939-16,546,009
(GRCh38/hg38)
Size:
71 bases
Orientation:
Minus strand
chr1:16,872,434-16,872,504
(GRCh37/hg19)
Size:
71 bases
Orientation:
Minus strand

Genomic View for TRG-CCC1-1 Gene

Genes around TRG-CCC1-1 on UCSC Golden Path with GeneCards custom track
TRG-CCC1-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
TRG-CCC1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRG-CCC1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRG-CCC1-1 Gene

Proteins for TRG-CCC1-1 Gene

Post-translational modifications for TRG-CCC1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRG-CCC1-1 Gene

Domains & Families for TRG-CCC1-1 Gene

Gene Families for TRG-CCC1-1 Gene

genes like me logo Genes that share domains with TRG-CCC1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRG-CCC1-1 Gene

Function for TRG-CCC1-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRG-CCC1-1 Gene

Localization for TRG-CCC1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRG-CCC1-1 Gene

Pathways & Interactions for TRG-CCC1-1 Gene

PathCards logo

SuperPathways for TRG-CCC1-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRG-CCC1-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRG-CCC1-1 Gene

Drugs & Compounds for TRG-CCC1-1 Gene

No Compound Related Data Available

Transcripts for TRG-CCC1-1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRG-CCC1-1 Gene

TRG-CCC1-1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRG-CCC1-1 Gene

No ASD Table

Relevant External Links for TRG-CCC1-1 Gene

GeneLoc Exon Structure for
TRG-CCC1-1

No data available for mRNA/cDNA for TRG-CCC1-1 Gene

Expression for TRG-CCC1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRG-CCC1-1 Gene

Orthologs for TRG-CCC1-1 Gene

No data available for Orthologs and Evolution for TRG-CCC1-1 Gene

Paralogs for TRG-CCC1-1 Gene

No data available for Paralogs for TRG-CCC1-1 Gene

Variants for TRG-CCC1-1 Gene

Additional Variant Information for TRG-CCC1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRG-CCC1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRG-CCC1-1 Gene

Disorders for TRG-CCC1-1 Gene

No disorders were found for TRG-CCC1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRG-CCC1-1 Gene

Publications for TRG-CCC1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3
  2. Failures in mitochondrial tRNAMet and tRNAGln metabolism caused by the novel 4401A>G mutation are involved in essential hypertension in a Han Chinese Family. (PMID: 19546379) Li R … Guan MX (Hypertension (Dallas, Tex. : 1979) 2009) 3
  3. Functional expression cloning of Nanog, a pluripotency sustaining factor in embryonic stem cells. (PMID: 12787505) Chambers I … Smith A (Cell 2003) 3
  4. Nucleotide sequence and transcription of a gene encoding human tRNAGlyCCC. (PMID: 2989090) Shortridge RD … Pirtle RM (Gene 1985) 3

No data available for Mastermind for TRG-CCC1-1 Gene

Products for TRG-CCC1-1 Gene

Sources for TRG-CCC1-1 Gene