Aliases for TRF-GAA3-1 Gene

Subcategory (RNA class) for TRF-GAA3-1 Gene

tRNA

Quality Score for this RNA gene is

13

Aliases for TRF-GAA3-1 Gene

  • TRNA-Phe (Anticodon GAA) 3-1 2 3
  • Transfer RNA Phenylalanine 5 (Anticodon GAA) 2 3
  • Transfer RNA-Phe (GAA) 3-1 2 3
  • TRNA-Phe (GAA) 3-1 3
  • TRNA-Phe-GAA-3-1 167
  • TRF-GAA3-1 2
  • RF00005 174
  • TRNAF5 3

External Ids for TRF-GAA3-1 Gene

Previous HGNC Symbols for TRF-GAA3-1 Gene

  • TRNAF5

Previous GeneCards Identifiers for TRF-GAA3-1 Gene

  • GC06M028812
  • GC06M028816
  • GC06M028927
  • GC06M028938
  • GC06M028830
  • GC06M028846
  • GC06M028851
  • GC06M028855
  • GC06M028879
  • GC06M028889
  • GC06M028901
  • GC06M028914

Summaries for TRF-GAA3-1 Gene

GeneCards Summary for TRF-GAA3-1 Gene

TRF-GAA3-1 (TRNA-Phe (Anticodon GAA) 3-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRF-GAA3-1 Gene

Additional gene information for TRF-GAA3-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRF-GAA3-1 Gene

Genomics for TRF-GAA3-1 Gene

GeneHancer (GH) Regulatory Elements for TRF-GAA3-1 Gene

Promoters and enhancers for TRF-GAA3-1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRF-GAA3-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRF-GAA3-1 Gene

Genomic Locations for TRF-GAA3-1 Gene
chr6:28,807,833-28,807,905
(GRCh38/hg38)
Size:
73 bases
Orientation:
Minus strand
chr6:28,775,610-28,775,682
(GRCh37/hg19)
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRF-GAA3-1 Gene

Genes around TRF-GAA3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRF-GAA3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRF-GAA3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for TRF-GAA3-1 Gene

Post-translational modifications for TRF-GAA3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRF-GAA3-1 Gene

Domains & Families for TRF-GAA3-1 Gene

Gene Families for TRF-GAA3-1 Gene

genes like me logo Genes that share domains with TRF-GAA3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRF-GAA3-1 Gene

Function for TRF-GAA3-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRF-GAA3-1 Gene

Localization for TRF-GAA3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRF-GAA3-1 Gene

Pathways & Interactions for TRF-GAA3-1 Gene

PathCards logo

SuperPathways for TRF-GAA3-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRF-GAA3-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRF-GAA3-1 Gene

Drugs & Compounds for TRF-GAA3-1 Gene

No Compound Related Data Available

Transcripts for TRF-GAA3-1 Gene

mRNA/cDNA for TRF-GAA3-1 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRF-GAA3-1 Gene

No ASD Table

Relevant External Links for TRF-GAA3-1 Gene

GeneLoc Exon Structure for
TRF-GAA3-1
ECgene alternative splicing isoforms for
TRF-GAA3-1

Expression for TRF-GAA3-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRF-GAA3-1 Gene

Orthologs for TRF-GAA3-1 Gene

No data available for Orthologs and Evolution for TRF-GAA3-1 Gene

Paralogs for TRF-GAA3-1 Gene

No data available for Paralogs for TRF-GAA3-1 Gene

Variants for TRF-GAA3-1 Gene

Additional Variant Information for TRF-GAA3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRF-GAA3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRF-GAA3-1 Gene

Disorders for TRF-GAA3-1 Gene

No disorders were found for TRF-GAA3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRF-GAA3-1 Gene

Publications for TRF-GAA3-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 56

Products for TRF-GAA3-1 Gene

Sources for TRF-GAA3-1 Gene