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Aliases for TRDJ1 Gene

Aliases for TRDJ1 Gene

  • T Cell Receptor Delta Joining 1 2 3
  • T-Cell Receptor Delta Joining 1 5
  • TCRD 3

External Ids for TRDJ1 Gene

Previous GeneCards Identifiers for TRDJ1 Gene

  • GC14U990272
  • GC14P020909
  • GC14P021988
  • GC14P022921
  • GC14P022933
  • GC14P022451
  • GC14P022463
  • GC14P022469
  • GC14P023967

Summaries for TRDJ1 Gene

Entrez Gene Summary for TRDJ1 Gene

  • T cell receptors recognize foreign antigens which have been processed as small peptides and bound to major histocompatibility complex (MHC) molecules at the surface of antigen presenting cells (APC). Each T cell receptor is a dimer consisting of one alpha and one beta chain or one delta and one gamma chain. In a single cell, the T cell receptor loci are rearranged and expressed in the order delta, gamma, beta, and alpha. If both delta and gamma rearrangements produce functional chains, the cell expresses delta and gamma. If not, the cell proceeds to rearrange the beta and alpha loci. This region represents the germline organization of the T cell receptor alpha and delta loci. Both the alpha and delta loci include V (variable), J (joining), and C (constant) segments and the delta locus also includes diversity (D) segments. The delta locus is situated within the alpha locus, between the alpha V and J segments. During T cell development, the delta chain is synthesized by a recombination event at the DNA level joining a D segment with a J segment; a V segment is then joined to the D-J gene. The alpha chain is synthesized by recombination joining a single V segment with a J segment. For both chains, the C segment is later joined by splicing at the RNA level. Recombination of many different V segments with several J segments provides a wide range of antigen recognition. Additional diversity is attained by junctional diversity, resulting from the random additional of nucleotides by terminal deoxynucleotidyltransferase. Five variable segments can be used in either alpha or delta chains and are described by TRAV/DV symbols. Several V and J segments of the alpha locus are known to be incapable of encoding a protein and are considered pseudogenes. [provided by RefSeq, Aug 2016]

GeneCards Summary for TRDJ1 Gene

TRDJ1 (T Cell Receptor Delta Joining 1) is a Protein Coding gene.

Additional gene information for TRDJ1 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRDJ1 Gene

Genomics for TRDJ1 Gene

GeneHancer (GH) Regulatory Elements for TRDJ1 Gene

Promoters and enhancers for TRDJ1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I022447 Enhancer 1 Ensembl ENCODE dbSUPER 550.8 -1.6 -1607 1.9 SRF ZNF687 SMAD5 NR2F1 MAX EBF1 ZNF791 FOXK2 POLR2A IKZF1 TRDD3 TRDJ1 METTL3 MMP14 ACIN1 C14orf93 CHD8 PRMT5 TRDD2 TRD
GH14I022451 Enhancer 0.5 dbSUPER 0.8 +2.1 2065 0.9 HLF MAFG NFE2 NFE2L2 TRDJ1 TRDJ4 TRD ENSG00000251002 TRA
GH14I022453 Enhancer 0.2 dbSUPER 0.8 +4.1 4149 1 TRDJ4 TRDJ1 ENSG00000251002 TRD TRA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRDJ1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRDJ1 Gene

Genomic Locations for TRDJ1 Gene
51 bases
Plus strand

Genomic View for TRDJ1 Gene

Genes around TRDJ1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRDJ1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRDJ1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRDJ1 Gene

Proteins for TRDJ1 Gene

  • Protein details for TRDJ1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    T-cell receptor delta joining 1
    Protein Accession:

    Protein attributes for TRDJ1 Gene

    17 amino acids
    Molecular mass:
    1872 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRDJ1 Gene

Post-translational modifications for TRDJ1 Gene

No Post-translational modifications

Other Protein References for TRDJ1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRDJ1 Gene

Domains & Families for TRDJ1 Gene

Gene Families for TRDJ1 Gene

Protein Domains for TRDJ1 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRDJ1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRDJ1 Gene

Function for TRDJ1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRDJ1 Gene

Localization for TRDJ1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRDJ1 Gene

Pathways & Interactions for TRDJ1 Gene

SuperPathways for TRDJ1 Gene

No Data Available

Interacting Proteins for TRDJ1 Gene

Gene Ontology (GO) - Biological Process for TRDJ1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TRDJ1 Gene

Drugs & Compounds for TRDJ1 Gene

No Compound Related Data Available

Transcripts for TRDJ1 Gene

mRNA/cDNA for TRDJ1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRDJ1 Gene

No ASD Table

Relevant External Links for TRDJ1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TRDJ1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRDJ1 Gene

NURSA nuclear receptor signaling pathways regulating expression of TRDJ1 Gene:

genes like me logo Genes that share expression patterns with TRDJ1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRDJ1 Gene

Orthologs for TRDJ1 Gene

Evolution for TRDJ1 Gene

Gene Tree for TRDJ1 (if available)
Gene Tree for TRDJ1 (if available)

No data available for Orthologs for TRDJ1 Gene

Paralogs for TRDJ1 Gene

No data available for Paralogs for TRDJ1 Gene

Variants for TRDJ1 Gene

Additional Variant Information for TRDJ1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRDJ1 Gene

Disorders for TRDJ1 Gene

No disorders were found for TRDJ1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRDJ1 Gene

Publications for TRDJ1 Gene

  1. Cloning of the gene encoding the delta subunit of the human T-cell receptor reveals its physical organization within the alpha-subunit locus and its involvement in chromosome translocations in T-cell malignancy. (PMID: 2836865) Isobe M … Croce CM (Proceedings of the National Academy of Sciences of the United States of America 1988) 2 3 58

Products for TRDJ1 Gene

Sources for TRDJ1 Gene

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