TRD-GTC2-6 Gene (RNA Gene)

TRNA-Asp (Anticodon GTC) 2-6

GC06P028779
GIFtS:
6
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Aliases for TRD-GTC2-6 Gene

Subcategory (RNA class) for TRD-GTC2-6 Gene

tRNA

Number of RNA Genes sources:

3 / 17

Aliases for TRD-GTC2-6 Gene

  • TRNA-Asp (Anticodon GTC) 2-6 2 3
  • Transfer RNA Aspartic Acid 8 (Anticodon GUC) 2 3
  • Transfer RNA-Asp (GTC) 2-10 2 3
  • Transfer RNA-Asp (GTC) 2-6 2 3
  • TRNA-Asp-GTC-2-10 3 162
  • TRNA-Asp-GTC-2-6 2 162
  • TRD-GTC2-10 2 3
  • TRNA-Asp (GTC) 2-6 3
  • TRNA-Asp-GTC-2-11 162
  • TRNA-Asp-GTC-2-3 162
  • TRNA-Asp-GTC-2-4 162
  • TRNA-Asp-GTC-2-9 162
  • TRNA-Asp-GTC-2-8 162
  • TRNA-Asp-GTC-2-1 162
  • TRNA-Asp-GTC-2-7 162
  • TRNA-Asp-GTC-2-2 162
  • TRNA-Asp-GTC-2-5 162
  • TRD-GTC2-11 2
  • TRD-GTC2-4 2
  • TRD-GTC2-9 2
  • TRD-GTC2-2 2
  • TRD-GTC2-3 2
  • TRD-GTC2-7 2
  • TRD-GTC2-1 2
  • TRD-GTC2-5 2
  • TRD-GTC2-6 2
  • TRD-GTC2-8 2
  • RF00005 168
  • TRNAD8 3

External Ids for TRD-GTC2-6 Gene

Previous HGNC Symbols for TRD-GTC2-6 Gene

  • TRNAD8
  • TRD-GTC2-10

Previous GeneCards Identifiers for TRD-GTC2-6 Gene

  • GC12P096036
  • GC06P027497
  • GC06P027625
  • GC06P027619
  • GC06P028074
  • GC06P027481

Summaries for TRD-GTC2-6 Gene

GeneCards Summary for TRD-GTC2-6 Gene

TRD-GTC2-6 (TRNA-Asp (Anticodon GTC) 2-6) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRD-GTC2-6 Gene

Additional gene information for TRD-GTC2-6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRD-GTC2-6 Gene

Genomics for TRD-GTC2-6 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for TRD-GTC2-6 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J027477 Promoter/Enhancer 1.6 ENCODE CraniofacialAtlas dbSUPER 600.7 -0.7 -709 2.6 ARHGAP35 CREB1 GATAD2A TEAD4 PRDM10 REST ZNF629 TFE3 ZNF512 LEF1 TRS-AGA2-2 TRD-GTC2-6 piR-36441-003 ZNF391 ZSCAN12 PGBD1 ZSCAN23 ZKSCAN8 ABT1 ZKSCAN3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRD-GTC2-6 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRD-GTC2-6 Gene

Genomic Locations for TRD-GTC2-6 Gene
chr6:27,479,674-27,479,745
(GRCh38/hg38)
Size:
72 bases
Orientation:
Plus strand
chr6:27,447,453-27,447,524
(GRCh37/hg19)
Size:
72 bases
Orientation:
Plus strand

Genomic View for TRD-GTC2-6 Gene

Genes around TRD-GTC2-6 on UCSC Golden Path with GeneCards custom track
TRD-GTC2-6 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
TRD-GTC2-6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRD-GTC2-6 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TRD-GTC2-6 Gene

Proteins for TRD-GTC2-6 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TRD-GTC2-6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRD-GTC2-6 Gene

Domains & Families for TRD-GTC2-6 Gene

Gene Families for TRD-GTC2-6 Gene

HGNC:
genes like me logo Genes that share domains with TRD-GTC2-6: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRD-GTC2-6 Gene

Function for TRD-GTC2-6 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for TRD-GTC2-6 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRD-GTC2-6 Gene

Localization for TRD-GTC2-6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRD-GTC2-6 Gene

Pathways & Interactions for TRD-GTC2-6 Gene

PathCards logo

SuperPathways for TRD-GTC2-6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRD-GTC2-6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRD-GTC2-6 Gene

Drugs & Compounds for TRD-GTC2-6 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TRD-GTC2-6 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRD-GTC2-6 Gene

TRD-GTC2-6 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRD-GTC2-6 Gene

No ASD Table

Relevant External Links for TRD-GTC2-6 Gene

GeneLoc Exon Structure for
TRD-GTC2-6

No data available for mRNA/cDNA for TRD-GTC2-6 Gene

Expression for TRD-GTC2-6 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRD-GTC2-6 Gene

Orthologs for TRD-GTC2-6 Gene

No data available for Orthologs and Evolution for TRD-GTC2-6 Gene

Paralogs for TRD-GTC2-6 Gene

No data available for Paralogs for TRD-GTC2-6 Gene

Variants for TRD-GTC2-6 Gene

Additional Variant Information for TRD-GTC2-6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRD-GTC2-6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRD-GTC2-6 Gene

Disorders for TRD-GTC2-6 Gene

No disorders were found for TRD-GTC2-6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRD-GTC2-6 Gene

Publications for TRD-GTC2-6 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3

No data available for Mastermind for TRD-GTC2-6 Gene

Products for TRD-GTC2-6 Gene

Sources for TRD-GTC2-6 Gene