TRC-GCA2-3 Gene (RNA Gene)

TRNA-Cys (Anticodon GCA) 2-3

GC17M039154
GIFtS:
7
See more...

Aliases for TRC-GCA2-3 Gene

Subcategory (RNA class) for TRC-GCA2-3 Gene

tRNA

Number of RNA Genes sources:

3 / 17

Aliases for TRC-GCA2-3 Gene

  • TRNA-Cys (Anticodon GCA) 2-3 2 3
  • Transfer RNA Cysteine 9 (Anticodon GCA) 2 3
  • Transfer RNA-Cys (GCA) 2-2 2 3
  • Transfer RNA-Cys (GCA) 2-3 2 3
  • TRNA-Cys-GCA-2-2 3 162
  • TRNA-Cys-GCA-2-3 2 162
  • TRC-GCA2-2 2 3
  • TRNA-Cys (GCA) 2-3 3
  • TRNA-Cys-GCA-2-1 162
  • TRNA-Cys-GCA-2-4 162
  • TRC-GCA2-3 2
  • TRC-GCA2-1 2
  • TRC-GCA2-4 2
  • RF00005 168
  • TRNAC9 3

External Ids for TRC-GCA2-3 Gene

Previous HGNC Symbols for TRC-GCA2-3 Gene

  • TRNAC9
  • TRC-GCA2-2

Summaries for TRC-GCA2-3 Gene

GeneCards Summary for TRC-GCA2-3 Gene

TRC-GCA2-3 (TRNA-Cys (Anticodon GCA) 2-3) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRC-GCA2-3 Gene

Additional gene information for TRC-GCA2-3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRC-GCA2-3 Gene

Genomics for TRC-GCA2-3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for TRC-GCA2-3 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17J039151 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +0.5 505 5.8 ZNF221 HNRNPL GATAD2A CTCF TEAD4 PRDM10 ZNF629 TFE3 ZNF512 LEF1 PLXDC1 lnc-ARL5C-4 TRC-GCA2-3 TRC-GCA2-4 piR-36245-004 piR-36245-005 MED1 CDK12 LOC105371762 SNORA21
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRC-GCA2-3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRC-GCA2-3 Gene

Genomic Locations for TRC-GCA2-3 Gene
chr17:39,153,734-39,153,805
(GRCh38/hg38)
Size:
72 bases
Orientation:
Minus strand
chr17:37,309,987-37,310,058
(GRCh37/hg19)
Size:
72 bases
Orientation:
Minus strand

Genomic View for TRC-GCA2-3 Gene

Genes around TRC-GCA2-3 on UCSC Golden Path with GeneCards custom track
TRC-GCA2-3 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
TRC-GCA2-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRC-GCA2-3 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TRC-GCA2-3 Gene

Proteins for TRC-GCA2-3 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TRC-GCA2-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRC-GCA2-3 Gene

Domains & Families for TRC-GCA2-3 Gene

Gene Families for TRC-GCA2-3 Gene

HGNC:
genes like me logo Genes that share domains with TRC-GCA2-3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRC-GCA2-3 Gene

Function for TRC-GCA2-3 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRC-GCA2-3 Gene

Localization for TRC-GCA2-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRC-GCA2-3 Gene

Pathways & Interactions for TRC-GCA2-3 Gene

PathCards logo

SuperPathways for TRC-GCA2-3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRC-GCA2-3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRC-GCA2-3 Gene

Drugs & Compounds for TRC-GCA2-3 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TRC-GCA2-3 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for TRC-GCA2-3 Gene

TRC-GCA2-3 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRC-GCA2-3 Gene

No ASD Table

Relevant External Links for TRC-GCA2-3 Gene

GeneLoc Exon Structure for
TRC-GCA2-3

No data available for mRNA/cDNA for TRC-GCA2-3 Gene

Expression for TRC-GCA2-3 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRC-GCA2-3 Gene

Orthologs for TRC-GCA2-3 Gene

No data available for Orthologs and Evolution for TRC-GCA2-3 Gene

Paralogs for TRC-GCA2-3 Gene

No data available for Paralogs for TRC-GCA2-3 Gene

Variants for TRC-GCA2-3 Gene

Additional Variant Information for TRC-GCA2-3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRC-GCA2-3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRC-GCA2-3 Gene

Disorders for TRC-GCA2-3 Gene

No disorders were found for TRC-GCA2-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRC-GCA2-3 Gene

Publications for TRC-GCA2-3 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3

No data available for Mastermind for TRC-GCA2-3 Gene

Products for TRC-GCA2-3 Gene

Sources for TRC-GCA2-3 Gene