Aliases for TRC-GCA14-1 Gene

Subcategory (RNA class) for TRC-GCA14-1 Gene

tRNA

Number of RNA Genes sources:

3 / 14

Aliases for TRC-GCA14-1 Gene

  • TRNA-Cys (Anticodon GCA) 14-1 2 3
  • Transfer RNA Cysteine 30 (Anticodon GCA) 2 3
  • Transfer RNA-Cys (GCA) 14-1 2 3
  • TRNA-Cys (GCA) 14-1 3
  • TRNA-Cys-GCA-14-1 165
  • TRC-GCA14-1 2
  • TRNAC30 3
  • RF00005 172

External Ids for TRC-GCA14-1 Gene

Previous HGNC Symbols for TRC-GCA14-1 Gene

  • TRNAC30

Summaries for TRC-GCA14-1 Gene

GeneCards Summary for TRC-GCA14-1 Gene

TRC-GCA14-1 (TRNA-Cys (Anticodon GCA) 14-1) is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRC-GCA14-1 Gene

Additional gene information for TRC-GCA14-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRC-GCA14-1 Gene

Genomics for TRC-GCA14-1 Gene

GeneHancer (GH) Regulatory Elements for TRC-GCA14-1 Gene

Promoters and enhancers for TRC-GCA14-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J038861 Enhancer 0.9 ENCODE 500.7 +0.1 132 0.2 BCLAF1 ZNF639 ZBTB5 AFF1 NR3C1 TARDBP CTBP1 ZEB1 SREBF2 DEAF1 RF00017-2369 TRC-GCA14-1 MED1
GH17J038862 Enhancer 0.9 ENCODE 500.7 +0.0 32 0 ZNF639 ZBTB5 AFF1 NR3C1 TARDBP CTBP1 ZEB1 SREBF2 DEAF1 NCOR1 TRC-GCA14-1 MED1 PIP4K2B RF00017-2369
GH17J038863 Enhancer 1 Ensembl ENCODE 0.7 -2.4 -2445 2.8 CTCF TGIF2 OSR2 ZNF316 ZBTB17 MAFF RAD21 SAP130 MAFK TBP PSMB3 TRC-GCA14-1 TRC-GCA2-2 piR-36245-002
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRC-GCA14-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRC-GCA14-1 Gene

Genomic Locations for TRC-GCA14-1 Gene
chr17:38,861,684-38,861,755
(GRCh38/hg38)
Size:
72 bases
Orientation:
Minus strand
chr17:37,017,937-37,018,008
(GRCh37/hg19)
Size:
72 bases
Orientation:
Minus strand

Genomic View for TRC-GCA14-1 Gene

Genes around TRC-GCA14-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRC-GCA14-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRC-GCA14-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRC-GCA14-1 Gene

Proteins for TRC-GCA14-1 Gene

Post-translational modifications for TRC-GCA14-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRC-GCA14-1 Gene

Domains & Families for TRC-GCA14-1 Gene

Gene Families for TRC-GCA14-1 Gene

genes like me logo Genes that share domains with TRC-GCA14-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRC-GCA14-1 Gene

Function for TRC-GCA14-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRC-GCA14-1 Gene

Localization for TRC-GCA14-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRC-GCA14-1 Gene

Pathways & Interactions for TRC-GCA14-1 Gene

PathCards logo

SuperPathways for TRC-GCA14-1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for TRC-GCA14-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRC-GCA14-1 Gene

Drugs & Compounds for TRC-GCA14-1 Gene

No Compound Related Data Available

Transcripts for TRC-GCA14-1 Gene

mRNA/cDNA for TRC-GCA14-1 Gene

1 RNACentral transcripts :
1 ENA transcripts :
2 GtRNAdb transcripts :
1 Rfam transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRC-GCA14-1 Gene

No ASD Table

Relevant External Links for TRC-GCA14-1 Gene

GeneLoc Exon Structure for
TRC-GCA14-1

Expression for TRC-GCA14-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRC-GCA14-1 Gene

Orthologs for TRC-GCA14-1 Gene

No data available for Orthologs and Evolution for TRC-GCA14-1 Gene

Paralogs for TRC-GCA14-1 Gene

No data available for Paralogs for TRC-GCA14-1 Gene

Variants for TRC-GCA14-1 Gene

Additional Variant Information for TRC-GCA14-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRC-GCA14-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRC-GCA14-1 Gene

Disorders for TRC-GCA14-1 Gene

No disorders were found for TRC-GCA14-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRC-GCA14-1 Gene

Publications for TRC-GCA14-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 54

No data available for Mastermind for TRC-GCA14-1 Gene

Products for TRC-GCA14-1 Gene

Sources for TRC-GCA14-1 Gene