Aliases for TRBVB Gene

Aliases for TRBVB Gene

  • T Cell Receptor Beta Variable B (Pseudogene) 2 3 5
  • TCRBV34S1 2 3
  • TRBVB 5

External Ids for TRBVB Gene

Previous GeneCards Identifiers for TRBVB Gene

  • GC07U990178
  • GC07P141782
  • GC07P141859
  • GC07P141905
  • GC07P142098
  • GC07P142418
  • GC07P142441
  • GC07P142489
  • GC07P142646
  • GC07P142716
  • GC07P142776
  • GC07P142812
  • GC07P142890
  • GC07P144207
  • GC07P144341
  • GC07P144471
  • GC07P144711
  • GC07P143020
  • GC07P143168
  • GC07P143367
  • GC07P143517
  • GC07P143648
  • GC07P143787
  • GC07P143925
  • GC07P144061

Summaries for TRBVB Gene

GeneCards Summary for TRBVB Gene

TRBVB (T Cell Receptor Beta Variable B (Pseudogene)) is a Pseudogene.

Additional gene information for TRBVB Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TRBVB Gene

Genomics for TRBVB Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TRBVB Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J142709 Enhancer 0.4 ENCODE 600.7 -1.4 -1351 0.9 TEAD4 NRF1 GABPB1 TRBVB lnc-PRSS1-7 TRBV28 lnc-PRSS1-1 TRBV27 TRBV25-1 lnc-PRSS2-6 TRB
GH07J142710 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +5.7 5698 12.6 RNF2 CREB1 CTCF JUND REST RAD21 TRIM22 PKNOX1 CBX3 NFE2 TRBV27 TRBV28 EPHB6 ENSG00000232533 TRBV7-3 PGBD4P1 TRBVB lnc-PRSS1-4 lnc-PRSS1-7 lnc-PRSS2-6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRBVB on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TRBVB Gene

Genomic Locations for TRBVB Gene
chr7:142,711,384-142,711,924
(GRCh38/hg38)
Size:
541 bases
Orientation:
Plus strand
chr7:142,419,212-142,419,752
(GRCh37/hg19)
Size:
541 bases
Orientation:
Plus strand

Genomic View for TRBVB Gene

Genes around TRBVB on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBVB Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBVB Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBVB Gene

Proteins for TRBVB Gene

No data available for DME Specific Peptides for TRBVB Gene

Domains & Families for TRBVB Gene

Gene Families for TRBVB Gene

genes like me logo Genes that share domains with TRBVB: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRBVB Gene

Function for TRBVB Gene

Phenotypes From GWAS Catalog for TRBVB Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBVB Gene

Localization for TRBVB Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBVB Gene

Pathways & Interactions for TRBVB Gene

PathCards logo

SuperPathways for TRBVB Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRBVB Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRBVB Gene

Drugs & Compounds for TRBVB Gene

No Compound Related Data Available

Transcripts for TRBVB Gene

mRNA/cDNA for TRBVB Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRBVB Gene

No ASD Table

Relevant External Links for TRBVB Gene

GeneLoc Exon Structure for
TRBVB

Expression for TRBVB Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRBVB Gene

mRNA differential expression in normal tissues according to GTEx for TRBVB Gene

This gene is overexpressed in Testis (x37.0), Brain - Nucleus accumbens (basal ganglia) (x4.5), and Muscle - Skeletal (x4.1).
genes like me logo Genes that share expression patterns with TRBVB: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBVB Gene

Orthologs for TRBVB Gene

Evolution for TRBVB Gene

ENSEMBL:
Gene Tree for TRBVB (if available)
TreeFam:
Gene Tree for TRBVB (if available)

No data available for Orthologs for TRBVB Gene

Paralogs for TRBVB Gene

No data available for Paralogs for TRBVB Gene

Variants for TRBVB Gene

Additional Variant Information for TRBVB Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBVB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBVB Gene

Disorders for TRBVB Gene

No disorders were found for TRBVB Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRBVB Gene

Publications for TRBVB Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L … Hood L (Science (New York, N.Y.) 1996) 2 3

Products for TRBVB Gene

Sources for TRBVB Gene