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Aliases for TRBV6-2 Gene

Aliases for TRBV6-2 Gene

  • T Cell Receptor Beta Variable 6-2 (Gene/Pseudogene) 2 3
  • V_segment Translation Product 3
  • TCRBV13S2A1T 3
  • TCRBV13S2 3
  • TCRBV6S2 3
  • TRBV62 3

External Ids for TRBV6-2 Gene

Previous GeneCards Identifiers for TRBV6-2 Gene

  • GC07U990228
  • GC07P141379
  • GC07P141456
  • GC07P141502
  • GC07P141696
  • GC07Pg41387
  • GC07P141387
  • GC07P142874
  • GC07P143008
  • GC07P143077
  • GC07P143227
  • GC07P143424
  • GC07P143576
  • GC07P143776

Summaries for TRBV6-2 Gene

GeneCards Summary for TRBV6-2 Gene

TRBV6-2 (T Cell Receptor Beta Variable 6-2 (Gene/Pseudogene)) is a Protein Coding gene. An important paralog of this gene is TRBV6-1.

Additional gene information for TRBV6-2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV6-2 Gene

Genomics for TRBV6-2 Gene

GeneHancer (GH) Regulatory Elements for TRBV6-2 Gene

Promoters and enhancers for TRBV6-2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I142348 Enhancer 0.3 dbSUPER 550.8 -1.0 -968 0.4 CEBPG TRBV6-2 TRBV4-2 TRB
GH07I142345 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.8 -3.2 -3192 0.3 TRBV4-2 TRBV6-2 TRB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRBV6-2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRBV6-2 Gene

Genomic Locations for TRBV6-2 Gene
chr7:142,349,152-142,349,664
(GRCh38/hg38)
Size:
513 bases
Orientation:
Plus strand

Genomic View for TRBV6-2 Gene

Genes around TRBV6-2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV6-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV6-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV6-2 Gene

Proteins for TRBV6-2 Gene

  • Protein details for TRBV6-2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0J9YXY3
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A0J9YXY3
    Secondary Accessions:
    • A0A588

    Protein attributes for TRBV6-2 Gene

    Size:
    114 amino acids
    Molecular mass:
    12525 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV6-2 Gene

Post-translational modifications for TRBV6-2 Gene

No Post-translational modifications

Other Protein References for TRBV6-2 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV6-2 Gene

Domains & Families for TRBV6-2 Gene

Gene Families for TRBV6-2 Gene

Protein Domains for TRBV6-2 Gene

Suggested Antigen Peptide Sequences for TRBV6-2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV6-2: view

No data available for UniProtKB/Swiss-Prot for TRBV6-2 Gene

Function for TRBV6-2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV6-2 Gene

Localization for TRBV6-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV6-2 Gene

Pathways & Interactions for TRBV6-2 Gene

SuperPathways for TRBV6-2 Gene

No Data Available

Interacting Proteins for TRBV6-2 Gene

Gene Ontology (GO) - Biological Process for TRBV6-2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV6-2 Gene

Drugs & Compounds for TRBV6-2 Gene

No Compound Related Data Available

Transcripts for TRBV6-2 Gene

mRNA/cDNA for TRBV6-2 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV6-2 Gene

No ASD Table

Relevant External Links for TRBV6-2 Gene

GeneLoc Exon Structure for
TRBV6-2
ECgene alternative splicing isoforms for
TRBV6-2

Expression for TRBV6-2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV6-2 Gene

Orthologs for TRBV6-2 Gene

Evolution for TRBV6-2 Gene

ENSEMBL:
Gene Tree for TRBV6-2 (if available)
TreeFam:
Gene Tree for TRBV6-2 (if available)

No data available for Orthologs for TRBV6-2 Gene

Paralogs for TRBV6-2 Gene

genes like me logo Genes that share paralogs with TRBV6-2: view

Variants for TRBV6-2 Gene

Additional Variant Information for TRBV6-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV6-2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV6-2 Gene

Disorders for TRBV6-2 Gene

Additional Disease Information for TRBV6-2

No disorders were found for TRBV6-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRBV6-2 Gene

Publications for TRBV6-2 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L … Hood L (Science (New York, N.Y.) 1996) 2 3 58
  2. Accurate detection of the tumor clone in peripheral T-cell lymphoma biopsies by flow cytometric analysis of TCR-Vβ repertoire. (PMID: 22627740) Salameire D … Jacob MC (Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 2012) 3 58
  3. The genomic structure of human V beta 6 T cell antigen receptor genes. (PMID: 1660526) Li Y … Posnett DN (The Journal of experimental medicine 1991) 3 58

Products for TRBV6-2 Gene

Sources for TRBV6-2 Gene

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