Aliases for TRBV5-7 Gene

Aliases for TRBV5-7 Gene

  • T Cell Receptor Beta Variable 5-7 (Non-Functional) 2 3 5 13
  • TCRBV5S7P 3
  • TCRBV5S7 3
  • TRBV57 3

External Ids for TRBV5-7 Gene

Previous GeneCards Identifiers for TRBV5-7 Gene

  • GC07U990231
  • GC07P141572
  • GC07P141649
  • GC07P141695
  • GC07P141913
  • GC07P141940
  • GC07M142112
  • GC07M142115
  • GC07M142121
  • GC07M142129
  • GC07P142748
  • GC07P142963
  • GC07P144316
  • GC07P144447
  • GC07P144667
  • GC07P143114
  • GC07P143266
  • GC07P143465
  • GC07P143605
  • GC07P143748
  • GC07P143877
  • GC07P144022
  • GC07P144173

Summaries for TRBV5-7 Gene

GeneCards Summary for TRBV5-7 Gene

TRBV5-7 (T Cell Receptor Beta Variable 5-7 (Non-Functional)) is a Protein Coding gene. An important paralog of this gene is TRBV5-5.

Additional gene information for TRBV5-7 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TRBV5-7 Gene

Genomics for TRBV5-7 Gene

GeneHancer (GH) Regulatory Elements for TRBV5-7 Gene

Promoters and enhancers for TRBV5-7 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J142518 Enhancer 0.2 Ensembl 500.7 +0.1 55 2.3 TRBV5-7 TRBV7-9 lnc-PRSS2-6 TRB
GH07J142528 Promoter 0.3 Ensembl 0.4 +8.6 8611 0.2 TRBV7-9 TRBV5-7 lnc-PRSS2-6 TRB
GH07J142514 Enhancer 0.2 Ensembl 0.7 -4.2 -4190 2.6 TRBV5-7 TRBV7-7 lnc-PRSS2-6 TRB
GH07J142513 Enhancer 0.2 Ensembl 0.4 -6.5 -6490 0.4 TRBV7-7 TRBV5-7 lnc-PRSS2-6 TRB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRBV5-7 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRBV5-7 Gene

Genomic Locations for TRBV5-7 Gene
chr7:142,520,090-142,520,556
(GRCh38/hg38)
Size:
467 bases
Orientation:
Plus strand
chr7:142,111,393-142,111,859
(GRCh37/hg19)
Size:
467 bases
Orientation:
Minus strand

Genomic View for TRBV5-7 Gene

Genes around TRBV5-7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV5-7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV5-7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV5-7 Gene

Proteins for TRBV5-7 Gene

  • Protein details for TRBV5-7 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0A0MS05-A0A0A0MS05_HUMAN
    Recommended name:
    T cell receptor beta variable 5-7 (non-functional)
    Protein Accession:
    A0A0A0MS05

    Protein attributes for TRBV5-7 Gene

    Size:
    114 amino acids
    Molecular mass:
    12386 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV5-7 Gene

Post-translational modifications for TRBV5-7 Gene

No Post-translational modifications

Other Protein References for TRBV5-7 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV5-7 Gene

Domains & Families for TRBV5-7 Gene

Gene Families for TRBV5-7 Gene

Protein Domains for TRBV5-7 Gene

genes like me logo Genes that share domains with TRBV5-7: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRBV5-7 Gene

Function for TRBV5-7 Gene

Phenotypes From GWAS Catalog for TRBV5-7 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV5-7 Gene

Localization for TRBV5-7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV5-7 Gene

Pathways & Interactions for TRBV5-7 Gene

PathCards logo

SuperPathways for TRBV5-7 Gene

No Data Available

Interacting Proteins for TRBV5-7 Gene

;

Gene Ontology (GO) - Biological Process for TRBV5-7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV5-7 Gene

Drugs & Compounds for TRBV5-7 Gene

No Compound Related Data Available

Transcripts for TRBV5-7 Gene

mRNA/cDNA for TRBV5-7 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV5-7 Gene

No ASD Table

Relevant External Links for TRBV5-7 Gene

GeneLoc Exon Structure for
TRBV5-7

Expression for TRBV5-7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRBV5-7 Gene

genes like me logo Genes that share expression patterns with TRBV5-7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV5-7 Gene

Orthologs for TRBV5-7 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRBV5-7 Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia -- 31
  • 47 (a)
ManyToMany
-- 31
  • 46 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 31
  • 42 (a)
OneToMany
Species where no ortholog for TRBV5-7 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV5-7 Gene

ENSEMBL:
Gene Tree for TRBV5-7 (if available)
TreeFam:
Gene Tree for TRBV5-7 (if available)

Paralogs for TRBV5-7 Gene

Variants for TRBV5-7 Gene

Additional Variant Information for TRBV5-7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV5-7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV5-7 Gene

Disorders for TRBV5-7 Gene

No disorders were found for TRBV5-7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRBV5-7 Gene

Publications for TRBV5-7 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L … Hood L (Science (New York, N.Y.) 1996) 2 3 54
  2. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier LW … Wilson RK (Nature 2003) 13 54

Products for TRBV5-7 Gene

Sources for TRBV5-7 Gene