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Aliases for TRBV12-5 Gene

Aliases for TRBV12-5 Gene

  • T Cell Receptor Beta Variable 12-5 2 3
  • V_segment Translation Product 3
  • TCRBV12S5 3
  • TCRBV8S3 3
  • TRBV125 3

External Ids for TRBV12-5 Gene

Previous GeneCards Identifiers for TRBV12-5 Gene

  • GC07U990198
  • GC07P141653
  • GC07P141730
  • GC07P141777
  • GC07P141999
  • GC07P142033
  • GC07P142048
  • GC07P142065
  • GC07P142080
  • GC07P142084
  • GC07P142096
  • GC07P142125
  • GC07Pg41661
  • GC07P142756
  • GC07P142972
  • GC07P143123
  • GC07P143336
  • GC07P143473
  • GC07P143614
  • GC07P143696

Summaries for TRBV12-5 Gene

GeneCards Summary for TRBV12-5 Gene

TRBV12-5 (T Cell Receptor Beta Variable 12-5) is a Protein Coding gene. An important paralog of this gene is TRBV12-4.

Additional gene information for TRBV12-5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV12-5 Gene

Genomics for TRBV12-5 Gene

GeneHancer (GH) Regulatory Elements for TRBV12-5 Gene

Promoters and enhancers for TRBV12-5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I142581 Enhancer 0.2 Ensembl 550.8 +0.5 484 0.8 TRBV12-5 TRBV14 TRB
GH07I142583 Enhancer 0.2 Ensembl 0.8 +2.8 2783 0.6 TRBV12-5 TRBV14 TRB
GH07I142568 Enhancer 0.2 Ensembl 0.4 -12.0 -12016 0.2 TRBV12-4 TRBV12-5 TRB
GH07I142564 Enhancer 0.2 Ensembl 0.4 -16.7 -16716 0.4 TRBV12-4 TRBV12-5 TRB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRBV12-5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRBV12-5 Gene

Genomic Locations for TRBV12-5 Gene
chr7:142,580,917-142,581,427
(GRCh38/hg38)
Size:
511 bases
Orientation:
Plus strand

Genomic View for TRBV12-5 Gene

Genes around TRBV12-5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV12-5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV12-5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV12-5 Gene

Proteins for TRBV12-5 Gene

  • Protein details for TRBV12-5 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GX78
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1B0GX78

    Protein attributes for TRBV12-5 Gene

    Size:
    115 amino acids
    Molecular mass:
    12997 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV12-5 Gene

Post-translational modifications for TRBV12-5 Gene

No Post-translational modifications

Other Protein References for TRBV12-5 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV12-5 Gene

Domains & Families for TRBV12-5 Gene

Gene Families for TRBV12-5 Gene

Protein Domains for TRBV12-5 Gene

Suggested Antigen Peptide Sequences for TRBV12-5 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV12-5: view

No data available for UniProtKB/Swiss-Prot for TRBV12-5 Gene

Function for TRBV12-5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV12-5 Gene

Localization for TRBV12-5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV12-5 Gene

Pathways & Interactions for TRBV12-5 Gene

SuperPathways for TRBV12-5 Gene

No Data Available

Interacting Proteins for TRBV12-5 Gene

Gene Ontology (GO) - Biological Process for TRBV12-5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV12-5 Gene

Drugs & Compounds for TRBV12-5 Gene

No Compound Related Data Available

Transcripts for TRBV12-5 Gene

mRNA/cDNA for TRBV12-5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV12-5 Gene

No ASD Table

Relevant External Links for TRBV12-5 Gene

GeneLoc Exon Structure for
TRBV12-5
ECgene alternative splicing isoforms for
TRBV12-5

Expression for TRBV12-5 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV12-5 Gene

Orthologs for TRBV12-5 Gene

Evolution for TRBV12-5 Gene

ENSEMBL:
Gene Tree for TRBV12-5 (if available)
TreeFam:
Gene Tree for TRBV12-5 (if available)

No data available for Orthologs for TRBV12-5 Gene

Paralogs for TRBV12-5 Gene

Variants for TRBV12-5 Gene

Additional Variant Information for TRBV12-5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV12-5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV12-5 Gene

Disorders for TRBV12-5 Gene

No disorders were found for TRBV12-5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRBV12-5 Gene

Publications for TRBV12-5 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L … Hood L (Science (New York, N.Y.) 1996) 2 3 58
  2. Analysis of a human V beta gene subfamily. (PMID: 3772297) Siu G … Hood LE (The Journal of experimental medicine 1986) 3 58
  3. Evolution of immunoglobulin V genes: evidence indicating that recently duplicated human V kappa sequences have diverged by gene conversion. (PMID: 6402305) Bentley DL … Rabbitts TH (Cell 1983) 3 58

Products for TRBV12-5 Gene

Sources for TRBV12-5 Gene

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