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Aliases for TRBV11-1 Gene

Aliases for TRBV11-1 Gene

  • T Cell Receptor Beta Variable 11-1 2 3
  • T-Cell Receptor Beta Variable 11-1 5
  • V_segment Translation Product 3
  • TCRBV11S1 3
  • TCRBV21S1 3
  • TRBV111 3

External Ids for TRBV11-1 Gene

Previous GeneCards Identifiers for TRBV11-1 Gene

  • GC07U990205
  • GC07P141460
  • GC07P141536
  • GC07P141582
  • GC07P141778
  • GC07P141780
  • GC07P141810
  • GC07P141853
  • GC07P142114
  • GC07M142224
  • GC07M142228
  • GC07M142257
  • GC07M142283
  • GC07M142306
  • GC07P142630
  • GC07P142946
  • GC07P143088
  • GC07P143241
  • GC07P143442
  • GC07P143588
  • GC07P143730

Summaries for TRBV11-1 Gene

GeneCards Summary for TRBV11-1 Gene

TRBV11-1 (T Cell Receptor Beta Variable 11-1) is a Protein Coding gene. Among its related pathways are G-protein signaling N-RAS regulation pathway and G-protein signaling_Regulation of RAC1 activity. An important paralog of this gene is TRBV11-3.

Additional gene information for TRBV11-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV11-1 Gene

Genomics for TRBV11-1 Gene

GeneHancer (GH) Regulatory Elements for TRBV11-1 Gene

Promoters and enhancers for TRBV11-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I142408 Enhancer 0.2 Ensembl 550.8 +0.4 429 0.2 TRBV11-1 TRBV12-1 TRB
GH07I142412 Enhancer 0.2 Ensembl 0.4 +5.2 5229 0.2 TRBV12-1 TRBV11-1 TRB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRBV11-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRBV11-1 Gene

Genomic Locations for TRBV11-1 Gene
chr7:142,407,672-142,408,136
(GRCh38/hg38)
Size:
465 bases
Orientation:
Plus strand
chr7:142,223,790-142,224,284
(GRCh37/hg19)

Genomic View for TRBV11-1 Gene

Genes around TRBV11-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV11-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV11-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV11-1 Gene

Proteins for TRBV11-1 Gene

  • Protein details for TRBV11-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0K0K1C0
    Recommended name:
    T-cell receptor beta variable 11-1
    Protein Accession:
    A0A0K0K1C0
    Secondary Accessions:
    • A0A075B6L9
    • A0A0A6YYP4
    • A0A582

    Protein attributes for TRBV11-1 Gene

    Size:
    115 amino acids
    Molecular mass:
    12817 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV11-1 Gene

Post-translational modifications for TRBV11-1 Gene

No Post-translational modifications

Other Protein References for TRBV11-1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV11-1 Gene

Domains & Families for TRBV11-1 Gene

Gene Families for TRBV11-1 Gene

Protein Domains for TRBV11-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV11-1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRBV11-1 Gene

Function for TRBV11-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV11-1 Gene

Localization for TRBV11-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV11-1 Gene

Drugs & Compounds for TRBV11-1 Gene

No Compound Related Data Available

Transcripts for TRBV11-1 Gene

mRNA/cDNA for TRBV11-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV11-1 Gene

No ASD Table

Relevant External Links for TRBV11-1 Gene

GeneLoc Exon Structure for
TRBV11-1
ECgene alternative splicing isoforms for
TRBV11-1

Expression for TRBV11-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRBV11-1 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV11-1 Gene

This gene is overexpressed in Whole Blood (x29.7), Pancreas (x5.6), and Small Intestine - Terminal Ileum (x5.0).
genes like me logo Genes that share expression patterns with TRBV11-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV11-1 Gene

Orthologs for TRBV11-1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRBV11-1 Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 53 (a)
ManyToMany
-- 34
  • 50 (a)
ManyToMany
-- 34
  • 45 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 37 (a)
OneToMany
Species where no ortholog for TRBV11-1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV11-1 Gene

ENSEMBL:
Gene Tree for TRBV11-1 (if available)
TreeFam:
Gene Tree for TRBV11-1 (if available)

Paralogs for TRBV11-1 Gene

Pseudogenes.org Pseudogenes for TRBV11-1 Gene

genes like me logo Genes that share paralogs with TRBV11-1: view

Variants for TRBV11-1 Gene

Additional Variant Information for TRBV11-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV11-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV11-1 Gene

Disorders for TRBV11-1 Gene

No disorders were found for TRBV11-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRBV11-1 Gene

Publications for TRBV11-1 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L … Hood L (Science (New York, N.Y.) 1996) 2 3 58
  2. Sequence and expression of a novel human T-cell receptor beta-chain variable gene segment subfamily. (PMID: 2272661) Wilson RK … Hood L (Immunogenetics 1990) 3 58
  3. Somatic mutation creates diversity in the major group of mouse immunoglobulin kappa light chains. (PMID: 6420501) Heinrich G … Tonegawa S (The Journal of experimental medicine 1984) 3 58

Products for TRBV11-1 Gene

Sources for TRBV11-1 Gene

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