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Aliases for TRAPPC2P2 Gene

Aliases for TRAPPC2P2 Gene

  • Trafficking Protein Particle Complex 2 Pseudogene 2 2 3 5
  • Spondyloepiphyseal Dysplasia, Late, Pseudogene 2 2 3
  • SEDLP2 3

External Ids for TRAPPC2P2 Gene

Previous HGNC Symbols for TRAPPC2P2 Gene

  • SEDLP2

Previous GeneCards Identifiers for TRAPPC2P2 Gene

  • GC08M072524
  • GC08M072360
  • GC08M067854

Summaries for TRAPPC2P2 Gene

GeneCards Summary for TRAPPC2P2 Gene

TRAPPC2P2 (Trafficking Protein Particle Complex 2 Pseudogene 2) is a Pseudogene.

Additional gene information for TRAPPC2P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRAPPC2P2 Gene

Genomics for TRAPPC2P2 Gene

GeneHancer (GH) Regulatory Elements for TRAPPC2P2 Gene

Promoters and enhancers for TRAPPC2P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I071520 Enhancer 0.5 ENCODE 0.2 -71.4 -71401 0.2 OSR2 PRDM6 FEZF1 KLF8 ZXDB ZNF18 EYA1 LOC102724772 LOC105375892 TRAPPC2P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRAPPC2P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRAPPC2P2 Gene

Genomic Locations for TRAPPC2P2 Gene
chr8:71,448,711-71,449,240
(GRCh38/hg38)
Size:
530 bases
Orientation:
Minus strand
chr8:72,360,946-72,361,475
(GRCh37/hg19)

Genomic View for TRAPPC2P2 Gene

Genes around TRAPPC2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRAPPC2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRAPPC2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRAPPC2P2 Gene

Proteins for TRAPPC2P2 Gene

Post-translational modifications for TRAPPC2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRAPPC2P2 Gene

Domains & Families for TRAPPC2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRAPPC2P2 Gene

Function for TRAPPC2P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRAPPC2P2 Gene

Localization for TRAPPC2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRAPPC2P2 Gene

Pathways & Interactions for TRAPPC2P2 Gene

SuperPathways for TRAPPC2P2 Gene

No Data Available

Interacting Proteins for TRAPPC2P2 Gene

Gene Ontology (GO) - Biological Process for TRAPPC2P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRAPPC2P2 Gene

Drugs & Compounds for TRAPPC2P2 Gene

No Compound Related Data Available

Transcripts for TRAPPC2P2 Gene

mRNA/cDNA for TRAPPC2P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRAPPC2P2 Gene

No ASD Table

Relevant External Links for TRAPPC2P2 Gene

GeneLoc Exon Structure for
TRAPPC2P2
ECgene alternative splicing isoforms for
TRAPPC2P2

Expression for TRAPPC2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRAPPC2P2 Gene

mRNA differential expression in normal tissues according to GTEx for TRAPPC2P2 Gene

This gene is overexpressed in Testis (x44.6) and Pituitary (x8.4).

NURSA nuclear receptor signaling pathways regulating expression of TRAPPC2P2 Gene:

TRAPPC2P2
genes like me logo Genes that share expression patterns with TRAPPC2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRAPPC2P2 Gene

Orthologs for TRAPPC2P2 Gene

Evolution for TRAPPC2P2 Gene

ENSEMBL:
Gene Tree for TRAPPC2P2 (if available)
TreeFam:
Gene Tree for TRAPPC2P2 (if available)

No data available for Orthologs for TRAPPC2P2 Gene

Paralogs for TRAPPC2P2 Gene

No data available for Paralogs for TRAPPC2P2 Gene

Variants for TRAPPC2P2 Gene

Additional Variant Information for TRAPPC2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRAPPC2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRAPPC2P2 Gene

Disorders for TRAPPC2P2 Gene

Additional Disease Information for TRAPPC2P2

Genetic Association Database
(GAD)

No disorders were found for TRAPPC2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRAPPC2P2 Gene

Publications for TRAPPC2P2 Gene

  1. Gene structure and expression study of the SEDL gene for spondyloepiphyseal dysplasia tarda. (PMID: 11031107) Gécz J … Mulley JC (Genomics 2000) 2 3 58
  2. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 44 58
  3. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 44 58

Products for TRAPPC2P2 Gene

Sources for TRAPPC2P2 Gene

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