Aliases for TRA-AGC15-1-001 Gene

Subcategory (RNA class) for TRA-AGC15-1-001 Gene

tRNA

Number of RNA Genes sources:

3 / 14

Aliases for TRA-AGC15-1-001 Gene

  • TRNA-Ala-AGC-15-1 165
  • TRA-AGC15-1 2
  • RF00005 172

Previous GeneCards Identifiers for TRA-AGC15-1-001 Gene

  • GC14P088982

No data available for External Ids for TRA-AGC15-1-001 Gene

Summaries for TRA-AGC15-1-001 Gene

GeneCards Summary for TRA-AGC15-1-001 Gene

TRA-AGC15-1-001 is an RNA Gene, and is affiliated with the tRNA class.

Rfam classification for TRA-AGC15-1-001 Gene

Additional gene information for TRA-AGC15-1-001 Gene


  • Search for TRA-AGC15-1-001 at DataMed
  • Search for TRA-AGC15-1-001 at HumanCyc

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRA-AGC15-1-001 Gene

Genomics for TRA-AGC15-1-001 Gene

GeneHancer (GH) Regulatory Elements for TRA-AGC15-1-001 Gene

Promoters and enhancers for TRA-AGC15-1-001 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J088978 Enhancer 0.8 ENCODE 500.7 +0.0 34 0.2 TCF12 USF1 TEAD4 NR3C1 CUX1 HCFC1 ZBTB17 REST TBP FOSL2 TRA-AGC15-1-001 ENSG00000258983 PTPN21 ZC3H14 piR-32314-009
GH14J088977 Enhancer 0.6 ENCODE 500.7 -1.1 -1106 0.2 REST AFF1 TGIF2 ZSCAN9 MIER1 SIN3A MBD1 EHMT2 DNMT3B MIER2 TRA-AGC15-1-001 lnc-EML5-2
GH14J088983 Enhancer 0.9 Ensembl ENCODE 0.7 +5.0 4996 1.6 TCF12 JUND FOS EP300 FOSL2 CEBPB JUN RCOR1 FOSL1 MAX TRA-AGC15-1-001 piR-32314-009
GH14J088954 Enhancer 0.3 Ensembl ENCODE 0.4 -23.7 -23653 1 TRA-AGC15-1-001 lnc-EML5-2
GH14J088976 Enhancer 0.2 Ensembl 0.7 -2.9 -2897 0.4 TRA-AGC15-1-001 lnc-EML5-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TRA-AGC15-1-001 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRA-AGC15-1-001 Gene

Genomic Locations for TRA-AGC15-1-001 Gene
chr14:88,979,098-88,979,170
(GRCh38/hg38)
Size:
73 bases
Orientation:
Plus strand

Genomic View for TRA-AGC15-1-001 Gene

Genes around TRA-AGC15-1-001 on UCSC Golden Path with GeneCards custom track

TRA-AGC15-1-001 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRA-AGC15-1-001 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for TRA-AGC15-1-001 Gene

Proteins for TRA-AGC15-1-001 Gene

Post-translational modifications for TRA-AGC15-1-001 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRA-AGC15-1-001 Gene

Domains & Families for TRA-AGC15-1-001 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TRA-AGC15-1-001 Gene

Function for TRA-AGC15-1-001 Gene

miRNA for TRA-AGC15-1-001 Gene

miRTarBase miRNAs that target TRA-AGC15-1-001

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for TRA-AGC15-1-001 Gene

Localization for TRA-AGC15-1-001 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRA-AGC15-1-001 Gene

Pathways & Interactions for TRA-AGC15-1-001 Gene

PathCards logo

SuperPathways for TRA-AGC15-1-001 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for TRA-AGC15-1-001 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TRA-AGC15-1-001 Gene

Drugs & Compounds for TRA-AGC15-1-001 Gene

No Compound Related Data Available

Transcripts for TRA-AGC15-1-001 Gene

mRNA/cDNA for TRA-AGC15-1-001 Gene

1 RNACentral transcripts :
1 ENA transcripts :
2 GtRNAdb transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for TRA-AGC15-1-001 Gene

No ASD Table

Relevant External Links for TRA-AGC15-1-001 Gene

GeneLoc Exon Structure for
TRA-AGC15-1-001

Expression for TRA-AGC15-1-001 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRA-AGC15-1-001 Gene

Orthologs for TRA-AGC15-1-001 Gene

No data available for Orthologs and Evolution for TRA-AGC15-1-001 Gene

Paralogs for TRA-AGC15-1-001 Gene

No data available for Paralogs for TRA-AGC15-1-001 Gene

Variants for TRA-AGC15-1-001 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for TRA-AGC15-1-001 Gene

Disorders for TRA-AGC15-1-001 Gene

No disorders were found for TRA-AGC15-1-001 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRA-AGC15-1-001 Gene

Publications for TRA-AGC15-1-001 Gene

No publications were found for TRA-AGC15-1-001 Gene.

No data available for Mastermind for TRA-AGC15-1-001 Gene

Products for TRA-AGC15-1-001 Gene

Sources for TRA-AGC15-1-001 Gene