Aliases for TPTE2P5 Gene

Aliases for TPTE2P5 Gene

  • Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 5 2 3 5
  • TPTE2 Pseudogene 3
  • TPTE2P5 5

External Ids for TPTE2P5 Gene

Previous GeneCards Identifiers for TPTE2P5 Gene

  • GC00U933134
  • GC13M041397

Summaries for TPTE2P5 Gene

GeneCards Summary for TPTE2P5 Gene

TPTE2P5 (Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 5) is a Pseudogene.

Additional gene information for TPTE2P5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TPTE2P5 Gene

Genomics for TPTE2P5 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TPTE2P5 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TPTE2P5 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TPTE2P5 Gene

Genomic Locations for TPTE2P5 Gene
chr13:40,796,985-40,921,750
(GRCh38/hg38)
Size:
124,766 bases
Orientation:
Minus strand
chr13:41,371,121-41,495,890
(GRCh37/hg19)
Size:
124,770 bases
Orientation:
Minus strand

Genomic View for TPTE2P5 Gene

Genes around TPTE2P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPTE2P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPTE2P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPTE2P5 Gene

Proteins for TPTE2P5 Gene

Post-translational modifications for TPTE2P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPTE2P5 Gene

Domains & Families for TPTE2P5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TPTE2P5 Gene

Function for TPTE2P5 Gene

Phenotypes From GWAS Catalog for TPTE2P5 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPTE2P5 Gene

Localization for TPTE2P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TPTE2P5 Gene

Pathways & Interactions for TPTE2P5 Gene

PathCards logo

SuperPathways for TPTE2P5 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TPTE2P5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TPTE2P5 Gene

Drugs & Compounds for TPTE2P5 Gene

No Compound Related Data Available

Transcripts for TPTE2P5 Gene

mRNA/cDNA for TPTE2P5 Gene

5 NCBI additional mRNA sequence :
5 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TPTE2P5 Gene

No ASD Table

Relevant External Links for TPTE2P5 Gene

GeneLoc Exon Structure for
TPTE2P5

Expression for TPTE2P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TPTE2P5 Gene

mRNA differential expression in normal tissues according to GTEx for TPTE2P5 Gene

This gene is overexpressed in Thyroid (x4.4).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for TPTE2P5

SOURCE GeneReport for Unigene cluster for TPTE2P5 Gene:

Hs.660718
genes like me logo Genes that share expression patterns with TPTE2P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPTE2P5 Gene

Orthologs for TPTE2P5 Gene

Evolution for TPTE2P5 Gene

ENSEMBL:
Gene Tree for TPTE2P5 (if available)
TreeFam:
Gene Tree for TPTE2P5 (if available)

No data available for Orthologs for TPTE2P5 Gene

Paralogs for TPTE2P5 Gene

No data available for Paralogs for TPTE2P5 Gene

Variants for TPTE2P5 Gene

Structural Variations from Database of Genomic Variants (DGV) for TPTE2P5 Gene

Variant ID Type Subtype PubMed ID
esv2747294 CNV deletion 23290073
esv2747295 CNV deletion 23290073
esv3892332 CNV gain 25118596
nsv1069747 CNV deletion 25765185
nsv1113561 CNV deletion 24896259
nsv1122811 CNV deletion 24896259
nsv974082 CNV duplication 23825009
nsv974083 CNV duplication 23825009

Additional Variant Information for TPTE2P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPTE2P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for TPTE2P5 Gene

Disorders for TPTE2P5 Gene

Additional Disease Information for TPTE2P5

No disorders were found for TPTE2P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TPTE2P5 Gene

Publications for TPTE2P5 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for TPTE2P5 Gene

Sources for TPTE2P5 Gene