Aliases for TPSP2 Gene

Aliases for TPSP2 Gene

  • Tryptase Pseudogene 2 2 3 5
  • Mastin 2 3
  • Tryptase Beta Pseudogene 3
  • TPSP2 5

External Ids for TPSP2 Gene

Previous GeneCards Identifiers for TPSP2 Gene

  • GC16U990163
  • GC16M001277
  • GC00U931360
  • GC16M001345
  • GC16M001347
  • GC16M001348
  • GC16M001349

Summaries for TPSP2 Gene

GeneCards Summary for TPSP2 Gene

TPSP2 (Tryptase Pseudogene 2) is a Pseudogene.

Additional gene information for TPSP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TPSP2 Gene

Genomics for TPSP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for TPSP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J001289 Promoter 0.6 Ensembl 600.7 -0.7 -728 0.4 MBD1 CEBPG VEZF1 PRDM10 TPSP2 lnc-TPSB2-5 lnc-UBE2I-4 lnc-UBE2I-5 UBE2I ENSG00000261505 lnc-UBE2I-3 TPSD1
GH16J001288 Enhancer 0.3 Ensembl 600.7 +0.8 772 0.2 ZNF687 MTA1 TPSP2 lnc-TPSB2-5 lnc-UBE2I-4 lnc-UBE2I-5 UBE2I TPSD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TPSP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for TPSP2 Gene

Genomic Locations for TPSP2 Gene
chr16:1,286,343-1,289,073
(GRCh38/hg38)
Size:
2,731 bases
Orientation:
Minus strand
chr16:1,336,344-1,339,074
(GRCh37/hg19)
Size:
2,731 bases
Orientation:
Minus strand

Genomic View for TPSP2 Gene

Genes around TPSP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPSP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPSP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPSP2 Gene

Proteins for TPSP2 Gene

No data available for DME Specific Peptides for TPSP2 Gene

Domains & Families for TPSP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TPSP2 Gene

Function for TPSP2 Gene

Phenotypes From GWAS Catalog for TPSP2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPSP2 Gene

Localization for TPSP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TPSP2 Gene

Pathways & Interactions for TPSP2 Gene

PathCards logo

SuperPathways for TPSP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TPSP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TPSP2 Gene

Drugs & Compounds for TPSP2 Gene

No Compound Related Data Available

Transcripts for TPSP2 Gene

mRNA/cDNA for TPSP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for TPSP2 Gene

No ASD Table

Relevant External Links for TPSP2 Gene

GeneLoc Exon Structure for
TPSP2

Expression for TPSP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TPSP2 Gene

mRNA differential expression in normal tissues according to GTEx for TPSP2 Gene

This gene is overexpressed in Pituitary (x23.8), Liver (x10.7), and Bladder (x6.0).
genes like me logo Genes that share expression patterns with TPSP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPSP2 Gene

Orthologs for TPSP2 Gene

Evolution for TPSP2 Gene

ENSEMBL:
Gene Tree for TPSP2 (if available)
TreeFam:
Gene Tree for TPSP2 (if available)

No data available for Orthologs for TPSP2 Gene

Paralogs for TPSP2 Gene

No data available for Paralogs for TPSP2 Gene

Variants for TPSP2 Gene

Additional Variant Information for TPSP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPSP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPSP2 Gene

Disorders for TPSP2 Gene

No disorders were found for TPSP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TPSP2 Gene

Publications for TPSP2 Gene

  1. Characterization of human gamma-tryptases, novel members of the chromosome 16p mast cell tryptase and prostasin gene families. (PMID: 10843716) Caughey GH … Verghese GM (Journal of immunology (Baltimore, Md. : 1950) 2000) 2 3
  2. New developments in the genetics and activation of mast cell proteases. (PMID: 12217407) Caughey GH (Molecular immunology 2002) 3

Products for TPSP2 Gene

Sources for TPSP2 Gene