Aliases for TPRKBP2 Gene

Aliases for TPRKBP2 Gene

  • TP53RK Binding Protein Pseudogene 2 2 3 5

External Ids for TPRKBP2 Gene

Summaries for TPRKBP2 Gene

GeneCards Summary for TPRKBP2 Gene

TPRKBP2 (TP53RK Binding Protein Pseudogene 2) is a Pseudogene.

Additional gene information for TPRKBP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for TPRKBP2 Gene

Genomics for TPRKBP2 Gene

GeneHancer (GH) Regulatory Elements for TPRKBP2 Gene

Promoters and enhancers for TPRKBP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J028109 Enhancer 0.9 ENCODE dbSUPER 500.7 +1.1 1082 1.3 HES1 MYC ZNF316 MAFF TRIM24 MAX MAFK PBX2 SPI1 NFE2 TPRKBP2 lnc-GSG1L-4 XPO6 lnc-GSG1L-3 lnc-GSG1L-5
GH16J028106 Enhancer 0.4 dbSUPER 0.7 +4.7 4721 1.4 HNF4A MAFK CTCF lnc-GSG1L-3 TPRKBP2 lnc-GSG1L-4 lnc-GSG1L-5 XPO6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around TPRKBP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TPRKBP2 Gene

Genomic Locations for TPRKBP2 Gene
chr16:28,111,173-28,111,647
(GRCh38/hg38)
Size:
475 bases
Orientation:
Minus strand
chr16:28,122,494-28,122,968
(GRCh37/hg19)
Size:
475 bases
Orientation:
Minus strand

Genomic View for TPRKBP2 Gene

Genes around TPRKBP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPRKBP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPRKBP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPRKBP2 Gene

Proteins for TPRKBP2 Gene

Post-translational modifications for TPRKBP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPRKBP2 Gene

Domains & Families for TPRKBP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for TPRKBP2 Gene

Function for TPRKBP2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPRKBP2 Gene

Localization for TPRKBP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TPRKBP2 Gene

Pathways & Interactions for TPRKBP2 Gene

PathCards logo

SuperPathways for TPRKBP2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for TPRKBP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for TPRKBP2 Gene

Drugs & Compounds for TPRKBP2 Gene

No Compound Related Data Available

Transcripts for TPRKBP2 Gene

mRNA/cDNA for TPRKBP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TPRKBP2 Gene

No ASD Table

Relevant External Links for TPRKBP2 Gene

GeneLoc Exon Structure for
TPRKBP2

Expression for TPRKBP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TPRKBP2 Gene

mRNA differential expression in normal tissues according to GTEx for TPRKBP2 Gene

This gene is overexpressed in Whole Blood (x21.8).
genes like me logo Genes that share expression patterns with TPRKBP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPRKBP2 Gene

Orthologs for TPRKBP2 Gene

Evolution for TPRKBP2 Gene

ENSEMBL:
Gene Tree for TPRKBP2 (if available)
TreeFam:
Gene Tree for TPRKBP2 (if available)

No data available for Orthologs for TPRKBP2 Gene

Paralogs for TPRKBP2 Gene

No data available for Paralogs for TPRKBP2 Gene

Variants for TPRKBP2 Gene

Additional Variant Information for TPRKBP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPRKBP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPRKBP2 Gene

Disorders for TPRKBP2 Gene

No disorders were found for TPRKBP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TPRKBP2 Gene

Publications for TPRKBP2 Gene

No publications were found for TPRKBP2 Gene.

No data available for Mastermind for TPRKBP2 Gene

Products for TPRKBP2 Gene

Sources for TPRKBP2 Gene